ENSG00000143157


Homo sapiens

Features
Gene ID: ENSG00000143157
  
Biological name :POGK
  
Synonyms : POGK / pogo transposable element derived with KRAB domain / Q9P215
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: 1
Band: q24.1
Gene start: 166839447
Gene end: 166856344
  
Corresponding Affymetrix probe sets: 218229_s_at (Human Genome U133 Plus 2.0 Array)   222564_at (Human Genome U133 Plus 2.0 Array)   239392_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000404402
Ensembl peptide - ENSP00000356849
Ensembl peptide - ENSP00000356850
NCBI entrez gene - 57645     See in Manteia.
RefSeq - XM_017001914
RefSeq - NM_001314014
RefSeq - NM_017542
RefSeq - XM_005245370
RefSeq - XM_011509814
RefSeq - XM_011509815
RefSeq Peptide - NP_001300943
RefSeq Peptide - NP_060012
swissprot - Q9P215
swissprot - A0A024R8Y1
swissprot - Q5TIJ2
Ensembl - ENSG00000143157
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 BX914205.2ENSDARG00000099590Danio rerio
 CR352209.1ENSDARG00000103972Danio rerio
 CR354398.1ENSDARG00000101994Danio rerio
 PogkENSMUSG00000040596Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001909  Krueppel-associated box
 IPR004875  DDE superfamily endonuclease domain
 IPR006600  HTH CenpB-type DNA-binding domain
 IPR009057  Homeobox-like domain superfamily
 IPR018586  Brinker DNA-binding domain
 IPR036051  KRAB domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0007275 multicellular organism development IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr