ENSG00000143416


Homo sapiens

Features
Gene ID: ENSG00000143416
  
Biological name :SELENBP1
  
Synonyms : Q13228 / SELENBP1 / selenium binding protein 1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: -1
Band: q21.3
Gene start: 151364302
Gene end: 151372733
  
Corresponding Affymetrix probe sets: 214433_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000406222
Ensembl peptide - ENSP00000412816
Ensembl peptide - ENSP00000416206
Ensembl peptide - ENSP00000413960
Ensembl peptide - ENSP00000357861
Ensembl peptide - ENSP00000390433
Ensembl peptide - ENSP00000395637
Ensembl peptide - ENSP00000396209
Ensembl peptide - ENSP00000397261
Ensembl peptide - ENSP00000400841
Ensembl peptide - ENSP00000402531
NCBI entrez gene - 8991     See in Manteia.
OMIM - 604188
RefSeq - NM_003944
RefSeq - NM_001258288
RefSeq - NM_001258289
RefSeq Peptide - NP_001245217
RefSeq Peptide - NP_001245218
RefSeq Peptide - NP_003935
swissprot - Q13228
swissprot - C9JVL0
swissprot - V9HWG1
swissprot - A6PVX1
swissprot - F2Z2W8
swissprot - F8WBA9
swissprot - F8WCR4
swissprot - H0Y532
Ensembl - ENSG00000143416
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 selenbp1ENSDARG00000024717Danio rerio
 ENSGALG00000018415Gallus gallus
 ENSGALG00000042695Gallus gallus
 ENSGALG00000044765Gallus gallus
 SELENBP1ENSGALG00000000866Gallus gallus
 P17563ENSMUSG00000068874Mus musculus
 Selenbp2ENSMUSG00000068877Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR008826  Selenium-binding protein
 IPR011042  Six-bladed beta-propeller, TolB-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0055114 oxidation-reduction process IEA
 cellular_componentGO:0001650 fibrillar center IDA
 cellular_componentGO:0005615 extracellular space HDA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005730 nucleolus IDA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008430 selenium binding IEA
 molecular_functionGO:0018549 methanethiol oxidase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr