ENSG00000143570


Homo sapiens

Features
Gene ID: ENSG00000143570
  
Biological name :SLC39A1
  
Synonyms : Q9NY26 / SLC39A1 / solute carrier family 39 member 1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: -1
Band: q21.3
Gene start: 153959099
Gene end: 153968184
  
Corresponding Affymetrix probe sets: 217778_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000479421
Ensembl peptide - ENSP00000443632
Ensembl peptide - ENSP00000484182
Ensembl peptide - ENSP00000309710
Ensembl peptide - ENSP00000348535
Ensembl peptide - ENSP00000357610
Ensembl peptide - ENSP00000357612
Ensembl peptide - ENSP00000392229
Ensembl peptide - ENSP00000392950
Ensembl peptide - ENSP00000407717
NCBI entrez gene - 27173     See in Manteia.
OMIM - 604740
RefSeq - NM_001271958
RefSeq - NM_001271957
RefSeq - NM_001271959
RefSeq - NM_001271960
RefSeq - NM_001271961
RefSeq - NM_014437
RefSeq Peptide - NP_055252
RefSeq Peptide - NP_001258886
RefSeq Peptide - NP_001258887
RefSeq Peptide - NP_001258888
RefSeq Peptide - NP_001258889
RefSeq Peptide - NP_001258890
swissprot - Q5T4K4
swissprot - A0A0A0MTL8
swissprot - Q5T4K2
swissprot - Q5T4K3
swissprot - Q9NY26
Ensembl - ENSG00000143570
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SLC39A1ENSGALG00000029687Gallus gallus
 Q9QZ03ENSMUSG00000052310Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q9NP94 / SLC39A2 / solute carrier family 39 member 2ENSG0000016579433
Q9BRY0 / SLC39A3 / solute carrier family 39 member 3ENSG0000014187330


Protein motifs (from Interpro)
Interpro ID Name
 IPR003689  Zinc/iron permease


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001701 in utero embryonic development IEA
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0006812 cation transport TAS
 biological_processGO:0006829 zinc ion transport IEA
 biological_processGO:0030001 metal ion transport IEA
 biological_processGO:0048701 embryonic cranial skeleton morphogenesis IEA
 biological_processGO:0055085 transmembrane transport IEA
 biological_processGO:0060173 limb development IEA
 biological_processGO:0071577 zinc ion transmembrane transport IMP
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005102 signaling receptor binding IEA
 molecular_functionGO:0005385 zinc ion transmembrane transporter activity TAS
 molecular_functionGO:0022890 inorganic cation transmembrane transporter activity TAS
 molecular_functionGO:0046873 metal ion transmembrane transporter activity IEA


Pathways (from Reactome)
Pathway description
Zinc influx into cells by the SLC39 gene family


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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