ENSG00000146038


Homo sapiens

Features
Gene ID: ENSG00000146038
  
Biological name :DCDC2
  
Synonyms : DCDC2 / doublecortin domain containing 2 / Q9UHG0
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 6
Strand: -1
Band: p22.3
Gene start: 24171756
Gene end: 24358052
  
Corresponding Affymetrix probe sets: 222925_at (Human Genome U133 Plus 2.0 Array)   222926_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000367715
Ensembl peptide - ENSP00000367711
Ensembl peptide - ENSP00000410939
NCBI entrez gene - 51473     See in Manteia.
OMIM - 605755
RefSeq - NM_016356
RefSeq - NM_001195610
RefSeq Peptide - NP_001182539
RefSeq Peptide - NP_057440
swissprot - Q9UHG0
swissprot - H0Y784
Ensembl - ENSG00000146038
  
Related genetic diseases (OMIM): 610212 - ?Deafness, autosomal recessive 66, 610212
  616217 - Nephronophthisis 19, 616217
  617394 - Sclerosing cholangitis, neonatal, 617394
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 DCDC2ENSGALG00000042454Gallus gallus
 Dcdc2aENSMUSG00000035910Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
A2VCK2 / DCDC2B / doublecortin domain containing 2BENSG0000022204627
A8MYV0 / DCDC2C / doublecortin domain containing 2CENSG0000021486627
RP1L1 / RP1 like 1ENSG0000018363821
RP1 / P56715 / RP1, axonemal microtubule associatedENSG0000010423720


Protein motifs (from Interpro)
Interpro ID Name
 IPR003533  Doublecortin domain
 IPR033036  Doublecortin domain-containing protein 2
 IPR036572  Doublecortin domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001764 neuron migration IEA
 biological_processGO:0006968 cellular defense response TAS
 biological_processGO:0007399 nervous system development IEA
 biological_processGO:0007605 sensory perception of sound IEA
 biological_processGO:0030030 cell projection organization IEA
 biological_processGO:0030111 regulation of Wnt signaling pathway IEA
 biological_processGO:0035556 intracellular signal transduction IEA
 biological_processGO:0045880 positive regulation of smoothened signaling pathway IMP
 biological_processGO:0060271 cilium assembly IMP
 biological_processGO:1902017 regulation of cilium assembly IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005815 microtubule organizing center IDA
 cellular_componentGO:0005829 cytosol IDA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005929 cilium IEA
 cellular_componentGO:0005930 axoneme IDA
 cellular_componentGO:0015630 microtubule cytoskeleton IDA
 cellular_componentGO:0042995 cell projection IEA
 cellular_componentGO:0060091 kinocilium ISS
 cellular_componentGO:0072686 mitotic spindle IDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0019894 kinesin binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000090 Nephronophthisis 
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 HP:0000407 Hearing loss, sensorineural "Hearing loss caused by damage or dysfunction of the auditory nerve (cranial nerve VIII)." [HPO:curators]
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 HP:0000952 Jaundice "Yellow pigmentation of the skin or sclera due to bilirubin, which in turn is the result of increased bilirubin concentration in the bloodstream." [HPO:curators]
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 HP:0000989 Pruritus "Pruritus is an itch or a sensation that makes a person want to scratch. This term refers to an abnormally increased disposition to experience pruritus." [HPO:curators]
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 HP:0001394 Cirrhosis 
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 HP:0001395 Hepatic fibrosis 
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 HP:0001396 Cholestasis 
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 HP:0001408 Bile duct proliferation 
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 HP:0001409 Portal hypertension 
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 HP:0001744 Splenomegaly "An abnormal enlargement of the spleen." [HPO:curators]
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 HP:0002240 Hepatomegaly "An abnormal enlargment of the liver." [HPO:curators]
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 HP:0002613 Biliary cirrhosis 
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 HP:0002910 Elevated transaminases "Elevations of the levels of SGOT and SGPT in the serum. SGOT (serum glutamic oxaloacetic transaminase) and SGPT (serum glutamic pyruvic transaminase) are transaminases primarily found in the liver and heart and are released into the bloodstream as the result of liver or heart damage. SGOT and SGPT are used clinically mainly as markers of liver damage." [HPO:curators]
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 HP:0003593 Early onset 
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 HP:0003676 Progressive disorder 
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 HP:0003774 End stage renal disease 
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 HP:0030991 Sclerosing cholangitis "Cholangitis associated with evident ductal fibrosis that develops as a consequence of long-standing bile duct inflammatory, obstruction, or ischemic injury; it can be obliterative or nonobliterative." []
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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