ENSG00000146587


Homo sapiens

Features
Gene ID: ENSG00000146587
  
Biological name :RBAK
  
Synonyms : Q9NYW8 / RBAK / RB associated KRAB zinc finger
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 7
Strand: 1
Band: p22.1
Gene start: 5045821
Gene end: 5069488
  
Corresponding Affymetrix probe sets: 1553122_s_at (Human Genome U133 Plus 2.0 Array)   228571_at (Human Genome U133 Plus 2.0 Array)   241366_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000275423
Ensembl peptide - ENSP00000380120
NCBI entrez gene - 57786     See in Manteia.
OMIM - 608191
RefSeq - NM_001204456
RefSeq - NM_021163
RefSeq Peptide - NP_001191385
RefSeq Peptide - NP_066986
swissprot - Q9NYW8
Ensembl - ENSG00000146587
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RbakENSMUSG00000061898Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ZNF12 / P17014 / zinc finger protein 12ENSG0000016463169
Q06732 / ZNF33B / zinc finger protein 33BENSG0000019669352
Q06730 / ZNF33A / zinc finger protein 33AENSG0000018918049
Q9HCZ1 / ZNF334 / zinc finger protein 334ENSG0000019818545
Q86T29 / ZNF605 / zinc finger protein 605ENSG0000019645844
Q8N8J6 / ZNF615 / zinc finger protein 615ENSG0000019761944
Q6ZMW2 / ZNF782 / zinc finger protein 782ENSG0000019659744
Q8TAQ5 / ZNF420 / zinc finger protein 420ENSG0000019705043
Q8N184 / ZNF567 / zinc finger protein 567ENSG0000018904243
P17025 / ZNF182 / zinc finger protein 182ENSG0000014711843
ZNF41 / P51814 / zinc finger protein 41ENSG0000014712442
Q5JVG2 / ZNF484 / zinc finger protein 484ENSG0000012708142
Q2M218 / ZNF630 / zinc finger protein 630ENSG0000022199441
Q3ZCX4 / ZNF568 / zinc finger protein 568ENSG0000019845341
Q9Y2H8 / ZNF510 / zinc finger protein 510ENSG0000008138641
ZNF84 / P51523 / zinc finger protein 84ENSG0000019804041
Q96RE9 / ZNF300 / zinc finger protein 300ENSG0000014590840
O94892 / ZNF432 / zinc finger protein 432ENSG0000025608739
Q2M3X9 / ZNF674 / zinc finger protein 674ENSG0000025119237
Q8NDW4 / ZNF248 / zinc finger protein 248ENSG0000019810537


Protein motifs (from Interpro)
Interpro ID Name
 IPR001909  Krueppel-associated box
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013087  Zinc finger C2H2-type
 IPR036051  KRAB domain superfamily
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated TAS
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0045892 negative regulation of transcription, DNA-templated TAS
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005634 nucleus TAS
 cellular_componentGO:0005654 nucleoplasm IDA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding NAS
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0008270 zinc ion binding NAS
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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