ENSMUSG00000061898


Mus musculus

Features
Gene ID: ENSMUSG00000061898
  
Biological name :Rbak
  
Synonyms : Mus musculus RB-associated KRAB zinc finger (Rbak), transcript variant 3, mRNA. / Q8BQC8 / Rbak
  
Possible biological names infered from orthology : Q9NYW8 / RB associated KRAB zinc finger
  
Species: Mus musculus
  
Chr. number: 5
Strand: -1
Band: G2
Gene start: 143172186
Gene end: 143180775
  
Corresponding Affymetrix probe sets: 10535418 (MoGene1.0st)   1455323_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000059273
Ensembl peptide - ENSMUSP00000128731
NCBI entrez gene - 57782     See in Manteia.
MGI - MGI:1927369
RefSeq - XM_006504724
RefSeq - NM_001045482
RefSeq - NM_001359235
RefSeq - NM_021326
RefSeq - XM_006504723
RefSeq Peptide - NP_067301
RefSeq Peptide - NP_001038947
RefSeq Peptide - NP_001346164
swissprot - Q8BQC8
Ensembl - ENSMUSG00000061898
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RBAKENSG00000146587Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Zfp12 / Q7TSI0 / zinc finger protein 12 / ZNF12* / P17014*ENSMUSG0000002958760
Zfp658 / zinc finger protein 658 / ZNF41* / ZNF484* / P51814* / Q5JVG2* / zinc finger protein 41* / zinc finger protein 484*ENSMUSG0000005659241
Zfp74 / Q80W31 / zinc finger protein 74ENSMUSG0000005997540
Zfp334 / zinc finger protein 334 / Q9HCZ1* / ZNF334*ENSMUSG0000001766739
Zfp300 / zinc finger protein 300ENSMUSG0000003107937
Zfp182 / zinc finger protein 182 / P17025* / ZNF182*ENSMUSG0000005473737
Zfp605 / zinc finger protein 605 / Q86T29* / ZNF605*ENSMUSG0000002328435
B2RXC5 / Zfp382 / zinc finger protein 382 / Q96SR6* / ZNF382*ENSMUSG0000007422030
Zfp248 / zinc finger protein 248 / Q8NDW4* / ZNF248*ENSMUSG0000003014530
Zfp663 / zinc finger protein 663ENSMUSG0000005682429


Protein motifs (from Interpro)
Interpro ID Name
 IPR001909  Krueppel-associated box
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013087  Zinc finger C2H2-type
 IPR036051  KRAB domain superfamily
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IBA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005654 nucleoplasm IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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