ENSG00000147403


Homo sapiens

Features
Gene ID: ENSG00000147403
  
Biological name :RPL10
  
Synonyms : P27635 / ribosomal protein L10 / RPL10
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: X
Strand: 1
Band: q28
Gene start: 154389955
Gene end: 154409168
  
Corresponding Affymetrix probe sets: 200724_at (Human Genome U133 Plus 2.0 Array)   200725_x_at (Human Genome U133 Plus 2.0 Array)   217680_x_at (Human Genome U133 Plus 2.0 Array)   221989_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000406125
Ensembl peptide - ENSP00000385621
Ensembl peptide - ENSP00000358832
Ensembl peptide - ENSP00000341730
Ensembl peptide - ENSP00000405064
Ensembl peptide - ENSP00000407754
Ensembl peptide - ENSP00000479103
Ensembl peptide - ENSP00000413436
Ensembl peptide - ENSP00000388600
Ensembl peptide - ENSP00000395025
Ensembl peptide - ENSP00000398047
NCBI entrez gene - 6134     See in Manteia.
OMIM - 312173
RefSeq - NM_001303626
RefSeq - NM_001256577
RefSeq - NM_001256580
RefSeq - NM_001303624
RefSeq - NM_001303625
RefSeq - NM_006013
RefSeq Peptide - NP_001243506
RefSeq Peptide - NP_006004
RefSeq Peptide - NP_001290555
RefSeq Peptide - NP_001290554
RefSeq Peptide - NP_001290553
RefSeq Peptide - NP_001243509
swissprot - X5D2T3
swissprot - A0A087WV22
swissprot - A6QRI9
swissprot - B8A6G2
swissprot - F8W7C6
swissprot - H7C123
swissprot - H7C2C5
swissprot - H7C2U2
swissprot - P27635
swissprot - X1WI28
Ensembl - ENSG00000147403
  
Related genetic diseases (OMIM): 300847 - {Autism, susceptibility to, X-linked 5}, 300847
  300998 - Mental retardation, X-linked, syndromic, 35, 300998
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rpl10ENSDARG00000025581Danio rerio


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q96L21 / RPL10L / ribosomal protein L10 likeENSG0000016549696


Protein motifs (from Interpro)
Interpro ID Name
 IPR001197  Ribosomal protein L10e
 IPR016180  Ribosomal protein L10e/L16
 IPR018255  Ribosomal protein L10e, conserved site
 IPR036920  Ribosomal protein L10e/L16 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000027 ribosomal large subunit assembly IBA
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IMP
 biological_processGO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay TAS
 biological_processGO:0006364 rRNA processing TAS
 biological_processGO:0006412 translation IEA
 biological_processGO:0006413 translational initiation TAS
 biological_processGO:0006417 regulation of translation IMP
 biological_processGO:0006614 SRP-dependent cotranslational protein targeting to membrane TAS
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0019083 viral transcription TAS
 biological_processGO:0043066 negative regulation of apoptotic process IMP
 biological_processGO:1990403 embryonic brain development IMP
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005783 endoplasmic reticulum IDA
 cellular_componentGO:0005790 smooth endoplasmic reticulum IDA
 cellular_componentGO:0005829 cytosol IDA
 cellular_componentGO:0005840 ribosome IEA
 cellular_componentGO:0016020 membrane HDA
 cellular_componentGO:0022625 cytosolic large ribosomal subunit IDA
 cellular_componentGO:0032991 protein-containing complex IDA
 molecular_functionGO:0003723 RNA binding IBA
 molecular_functionGO:0003735 structural constituent of ribosome IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0045182 translation regulator activity IMP


Pathways (from Reactome)
Pathway description
L13a-mediated translational silencing of Ceruloplasmin expression
Peptide chain elongation
SRP-dependent cotranslational protein targeting to membrane
Viral mRNA Translation
Selenocysteine synthesis
Major pathway of rRNA processing in the nucleolus and cytosol
Formation of a pool of free 40S subunits
GTP hydrolysis and joining of the 60S ribosomal subunit
Eukaryotic Translation Termination
Regulation of expression of SLITs and ROBOs
Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000028 Cryptorchidism "Absence of one or both testes from the scrotum owing to failure of the testis or testes to descend through the inguinal canal to the testis." [HPO:curators]
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 HP:0000047 Hypospadias "Displacement of the urethral opening on the ventral (inferior) surface of the penis." [HPO:curators]
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 HP:0000219 Thin upper lip 
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 HP:0000252 Microcephaly "Microcephaly is a neurodevelopmental disorder in which the circumference of the head is more than two standard deviations smaller than the age- and gender-dependent norm." [HPO:curators]
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 HP:0000303 Mandibular prognathia "Abnormal prominence of the chin related to an abnormally long mandible." [HPO:curators]
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 HP:0000407 Hearing loss, sensorineural "Hearing loss caused by damage or dysfunction of the auditory nerve (cranial nerve VIII)." [HPO:curators]
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 HP:0000411 Protruding ears 
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 HP:0000678 Dental overcrowding 
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 HP:0000954 Transverse palmar creases "The presence of a single palmar crease (instead of the two palmar creases that are typically present)." [HPO:curators]
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 HP:0001182 Tapered fingers 
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001252 Muscular hypotonia "Muscular hypotonia is an abnormally low muscle tone (the amount of tension or resistance to movement in a muscle), often involving reduced muscle strength. Hypotonia is characterized by a diminished resistance to passive stretching." [HPO:curators]
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 HP:0001601 Laryngomalacia 
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 HP:0001999 Facial dysmorphism 
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 HP:0002020 Gastroesophageal reflux 
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 HP:0002719 Recurrent infections 
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 HP:0004415 Pulmonary artery stenosis 
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 HP:0006101 Finger syndactyly "Webbing or fusion of the fingers, involving soft parts only or including bone structure. Bony fusions are revered to as "bony" Syndactyly if the fusion occurs in a radio-ulnar axis. Fusions of bones of the fingers in a proximo-distal axis are refered to as "Symphalangism"." [HPO:curators]
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 HP:0006380 Knee flexion deformities 
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 HP:0006466 Contractures of the ankles 
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 HP:0008850 Postnatal growth retardation, severe 
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 HP:0009796 Branchial cyst "A branchial cyst is a remnant of embryonic development resulting from a failure of obliteration of the second branchial cleft and consists of a subcutaneous cystic mass located between the sternocleidomastoid muscle and the pharynx." [HPO:curators]
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 HP:0012033 Sacral lipoma "Presence of a lipoma in the region of the sacrum." [HPO:probinson]
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 HP:0012385 Camptodactyly "The distal interphalangeal joint and/or the proximal interphalangeal joint of the fingers or toes cannot be extended to 180 degrees by either active or passive extension." [HPO:probinson]
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 HP:0100716 Autoagression "Aggression towards oneself." [HPO:sdoelken]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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