ENSG00000147687


Homo sapiens

Features
Gene ID: ENSG00000147687
  
Biological name :TATDN1
  
Synonyms : Q6P1N9 / TatD DNase domain containing 1 / TATDN1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 8
Strand: -1
Band: q24.13
Gene start: 124488485
Gene end: 124539458
  
Corresponding Affymetrix probe sets: 223231_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000428609
Ensembl peptide - ENSP00000429541
Ensembl peptide - ENSP00000487380
Ensembl peptide - ENSP00000476180
Ensembl peptide - ENSP00000431052
Ensembl peptide - ENSP00000430756
Ensembl peptide - ENSP00000430481
Ensembl peptide - ENSP00000430274
Ensembl peptide - ENSP00000430201
Ensembl peptide - ENSP00000429831
Ensembl peptide - ENSP00000276692
Ensembl peptide - ENSP00000427807
Ensembl peptide - ENSP00000428109
Ensembl peptide - ENSP00000428336
Ensembl peptide - ENSP00000428580
NCBI entrez gene - 83940     See in Manteia.
RefSeq - XM_017013899
RefSeq - NM_001146160
RefSeq - NM_001317889
RefSeq - NM_001317890
RefSeq - NM_001317891
RefSeq - NM_032026
RefSeq - XM_006716666
RefSeq - XM_006716667
RefSeq - XM_006716668
RefSeq - XM_006716669
RefSeq - XM_006716670
RefSeq - XM_006716671
RefSeq - XM_011517331
RefSeq - XM_017013895
RefSeq - XM_017013896
RefSeq - XM_017013897
RefSeq - XM_017013898
RefSeq Peptide - NP_001304818
RefSeq Peptide - NP_001304819
RefSeq Peptide - NP_001304820
RefSeq Peptide - NP_114415
RefSeq Peptide - NP_001139632
swissprot - E5RI69
swissprot - E5RH86
swissprot - E5RGF2
swissprot - E5RG62
swissprot - E5RG17
swissprot - G5EA19
swissprot - H0YBX2
swissprot - U3KQS5
swissprot - A0A0D9SGD3
swissprot - Q6P1N9
swissprot - E5RK70
swissprot - E5RJY6
swissprot - E5RID7
Ensembl - ENSG00000147687
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tatdn1ENSDARG00000036924Danio rerio
 TATDN1ENSGALG00000041072Gallus gallus
 Q6P8M1ENSMUSG00000050891Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q93075 / TATDN2 / TatD DNase domain containing 2ENSG0000015701422
AC022384.1ENSG0000027241020


Protein motifs (from Interpro)
Interpro ID Name
 IPR001130  TatD family
 IPR018228  Deoxyribonuclease, TatD-related, conserved site
 IPR032466  Metal-dependent hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006259 DNA metabolic process IEA
 biological_processGO:0006308 DNA catabolic process IBA
 biological_processGO:0090305 nucleic acid phosphodiester bond hydrolysis IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IDA
 molecular_functionGO:0004518 nuclease activity IEA
 molecular_functionGO:0004536 deoxyribonuclease activity IBA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0016788 hydrolase activity, acting on ester bonds IEA
 molecular_functionGO:0016888 endodeoxyribonuclease activity, producing 5"-phosphomonoesters IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr