ENSMUSG00000050891


Mus musculus

Features
Gene ID: ENSMUSG00000050891
  
Biological name :Tatdn1
  
Synonyms : Putative deoxyribonuclease TATDN1 / Q6P8M1 / Tatdn1
  
Possible biological names infered from orthology : Q6P1N9 / TatD DNase domain containing 1
  
Species: Mus musculus
  
Chr. number: 15
Strand: -1
Band: D1
Gene start: 58890155
Gene end: 58933738
  
Corresponding Affymetrix probe sets: 10428842 (MoGene1.0st)   1438513_at (Mouse Genome 430 2.0 Array)   1439996_at (Mouse Genome 430 2.0 Array)   1444644_x_at (Mouse Genome 430 2.0 Array)   1448033_at (Mouse Genome 430 2.0 Array)   1458679_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000154677
Ensembl peptide - ENSMUSP00000154049
Ensembl peptide - ENSMUSP00000154152
Ensembl peptide - ENSMUSP00000105783
Ensembl peptide - ENSMUSP00000153779
Ensembl peptide - ENSMUSP00000153820
NCBI entrez gene - 69694     See in Manteia.
MGI - MGI:1916944
RefSeq - XM_017316744
RefSeq - NM_175151
RefSeq - XM_006521373
RefSeq - XM_006521374
RefSeq - XM_011245726
RefSeq - XM_006521365
RefSeq - XM_006521366
RefSeq - XM_006521367
RefSeq - XM_006521368
RefSeq - XM_006521371
RefSeq - XM_006521372
RefSeq Peptide - NP_780360
swissprot - Q6P8M1
swissprot - A0A0R4J1E8
Ensembl - ENSMUSG00000050891
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tatdn1ENSDARG00000036924Danio rerio
 TATDN1ENSGALG00000041072Gallus gallus
 Q6P1N9ENSG00000147687Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Tatdn2 / putative deoxyribonuclease TATDN2 isoform 1 / Q93075* / AC022384.1* / TatD DNase domain containing 2*ENSMUSG0000005695223


Protein motifs (from Interpro)
Interpro ID Name
 IPR001130  TatD family
 IPR018228  Deoxyribonuclease, TatD-related, conserved site
 IPR032466  Metal-dependent hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006259 DNA metabolic process IEA
 biological_processGO:0006308 DNA catabolic process IBA
 biological_processGO:0090305 nucleic acid phosphodiester bond hydrolysis IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm ISO
 molecular_functionGO:0004518 nuclease activity IEA
 molecular_functionGO:0004536 deoxyribonuclease activity IBA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0016788 hydrolase activity, acting on ester bonds IEA
 molecular_functionGO:0016888 endodeoxyribonuclease activity, producing 5"-phosphomonoesters IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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