ENSG00000148985


Homo sapiens

Features
Gene ID: ENSG00000148985
  
Biological name :PGAP2
  
Synonyms : PGAP2 / post-GPI attachment to proteins 2 / Q9UHJ9
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 11
Strand: 1
Band: p15.4
Gene start: 3797724
Gene end: 3826371
  
Corresponding Affymetrix probe sets: 215293_s_at (Human Genome U133 Plus 2.0 Array)   41858_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000434507
Ensembl peptide - ENSP00000434419
Ensembl peptide - ENSP00000434631
Ensembl peptide - ENSP00000482118
Ensembl peptide - ENSP00000481391
Ensembl peptide - ENSP00000437203
Ensembl peptide - ENSP00000435799
Ensembl peptide - ENSP00000435703
Ensembl peptide - ENSP00000435338
Ensembl peptide - ENSP00000435223
Ensembl peptide - ENSP00000434772
Ensembl peptide - ENSP00000278243
Ensembl peptide - ENSP00000300730
Ensembl peptide - ENSP00000380183
Ensembl peptide - ENSP00000380188
Ensembl peptide - ENSP00000380190
Ensembl peptide - ENSP00000431851
Ensembl peptide - ENSP00000432123
Ensembl peptide - ENSP00000432215
Ensembl peptide - ENSP00000432721
Ensembl peptide - ENSP00000433377
Ensembl peptide - ENSP00000433748
Ensembl peptide - ENSP00000434088
Ensembl peptide - ENSP00000434401
NCBI entrez gene - 27315     See in Manteia.
OMIM - 615187
RefSeq - XM_017017560
RefSeq - NM_001346405
RefSeq - NM_014489
RefSeq - XM_006718181
RefSeq - XM_006718183
RefSeq - XM_006718185
RefSeq - XM_006718186
RefSeq - XM_006718190
RefSeq - XM_006718191
RefSeq - XM_006718192
RefSeq - XM_006718193
RefSeq - XM_011519990
RefSeq - XM_011519991
RefSeq - XM_011519992
RefSeq - XM_011519993
RefSeq - XM_011519994
RefSeq - XM_011519995
RefSeq - XM_011519996
RefSeq - XM_011519997
RefSeq - XM_011519998
RefSeq - XM_011519999
RefSeq - XM_011520000
RefSeq - XM_011520001
RefSeq - XM_011520002
RefSeq - XM_011520003
RefSeq - XM_011520004
RefSeq - XM_011520005
RefSeq - XM_011520006
RefSeq - XM_011520007
RefSeq - XM_017017556
RefSeq - XM_017017557
RefSeq - XM_017017558
RefSeq - XM_017017559
RefSeq - NM_001145438
RefSeq - NM_001256235
RefSeq - NM_001256236
RefSeq - NM_001256237
RefSeq - NM_001256238
RefSeq - NM_001256239
RefSeq - NM_001256240
RefSeq - NM_001283038
RefSeq - NM_001283039
RefSeq - NM_001283040
RefSeq - NM_001346398
RefSeq - NM_001346400
RefSeq - NM_001346402
RefSeq - NM_001346404
RefSeq Peptide - NP_001243165
RefSeq Peptide - NP_001243167
RefSeq Peptide - NP_001243168
RefSeq Peptide - NP_001243169
RefSeq Peptide - NP_001269967
RefSeq Peptide - NP_001269968
RefSeq Peptide - NP_001269969
RefSeq Peptide - NP_001333327
RefSeq Peptide - NP_001333328
RefSeq Peptide - NP_001333329
RefSeq Peptide - NP_001333331
RefSeq Peptide - NP_001333333
RefSeq Peptide - NP_001333334
RefSeq Peptide - NP_055304
RefSeq Peptide - NP_001138910
RefSeq Peptide - NP_001243164
RefSeq Peptide - NP_001243166
swissprot - E9PQ19
swissprot - E9PKT0
swissprot - B7Z2X5
swissprot - A8MZF5
swissprot - A8MYS5
swissprot - A0A0A0MS75
swissprot - A0A024RCD5
swissprot - H0YCQ4
swissprot - H0YDC6
swissprot - H0YDJ5
swissprot - H0YDQ4
swissprot - H0YEE9
swissprot - A0A024RCC6
swissprot - E9PRZ2
swissprot - Q9UHJ9
Ensembl - ENSG00000148985
  
Related genetic diseases (OMIM): 614207 - Hyperphosphatasia with mental retardation syndrome 3, 614207
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pgap2ENSDARG00000044596Danio rerio
 PGAP2ENSGALG00000027762Gallus gallus
 Pgap2ENSMUSG00000030990Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR019402  Frag1/DRAM/Sfk1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006506 GPI anchor biosynthetic process ISS
 biological_processGO:0006974 cellular response to DNA damage stimulus IEA
 biological_processGO:0008630 intrinsic apoptotic signaling pathway in response to DNA damage IEA
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0042770 signal transduction in response to DNA damage IEA
 biological_processGO:0042771 intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator IEA
 biological_processGO:1902230 negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage IEA
 cellular_componentGO:0000139 Golgi membrane ISS
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane ISS
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008565 protein transporter activity ISS


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000252 Microcephaly "Microcephaly is a neurodevelopmental disorder in which the circumference of the head is more than two standard deviations smaller than the age- and gender-dependent norm." [HPO:curators]
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001256 Mental retardation, mild "Mild mental retardation is defined as an intelligence quotient (IQ) in the range of 50-69." [HPO:curators]
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
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 HP:0002059 Cerebral atrophy 
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 HP:0002905 Hyperphosphatemia 
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 HP:0003155 Elevated alkaline phosphatase "Abnormally increased serum levels of `alkaline phosphatase activity` (GO:0004035)." [HPO:probinson]
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 HP:0003577 Onset at birth 
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 HP:0010864 Mental retardation, severe "Moderate mental retardation is defined as an intelligence quotient (IQ) in the range of 20-34." [HPO:probinson]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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