ENSMUSG00000030990


Mus musculus

Features
Gene ID: ENSMUSG00000030990
  
Biological name :Pgap2
  
Synonyms : Pgap2 / Post-GPI attachment to proteins factor 2 / Q3TQR0
  
Possible biological names infered from orthology : post-GPI attachment to proteins 2 / Q9UHJ9
  
Species: Mus musculus
  
Chr. number: 7
Strand: 1
Band: E2
Gene start: 102210208
Gene end: 102238567
  
Corresponding Affymetrix probe sets: 10555671 (MoGene1.0st)   1424614_at (Mouse Genome 430 2.0 Array)   1424615_at (Mouse Genome 430 2.0 Array)   1424616_s_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000116858
Ensembl peptide - ENSMUSP00000115590
Ensembl peptide - ENSMUSP00000117450
Ensembl peptide - ENSMUSP00000123570
Ensembl peptide - ENSMUSP00000123523
Ensembl peptide - ENSMUSP00000123444
Ensembl peptide - ENSMUSP00000122482
Ensembl peptide - ENSMUSP00000121988
Ensembl peptide - ENSMUSP00000121521
Ensembl peptide - ENSMUSP00000119692
Ensembl peptide - ENSMUSP00000119683
Ensembl peptide - ENSMUSP00000118677
Ensembl peptide - ENSMUSP00000033292
Ensembl peptide - ENSMUSP00000113261
Ensembl peptide - ENSMUSP00000113574
Ensembl peptide - ENSMUSP00000114016
Ensembl peptide - ENSMUSP00000114853
NCBI entrez gene - 233575     See in Manteia.
MGI - MGI:2385286
RefSeq - XM_017322182
RefSeq - NM_001291358
RefSeq - NM_145583
RefSeq - XM_006507641
RefSeq - XM_006507642
RefSeq - XM_006507643
RefSeq - XM_006507644
RefSeq - XM_006507645
RefSeq - XM_006507646
RefSeq - XM_006507648
RefSeq - XM_006507649
RefSeq - XM_006507650
RefSeq - XM_006507651
RefSeq Peptide - NP_001278287
RefSeq Peptide - NP_663558
swissprot - D6RG97
swissprot - D6RCV1
swissprot - D3Z4K4
swissprot - D3Z1R5
swissprot - D3Z1Q8
swissprot - D3Z1F0
swissprot - D3YZI4
swissprot - D3YZA4
swissprot - D3YYE3
swissprot - D3YUX4
swissprot - Q3TQR0
swissprot - A0A0R4J1P4
Ensembl - ENSMUSG00000030990
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pgap2ENSDARG00000044596Danio rerio
 PGAP2ENSGALG00000027762Gallus gallus
 PGAP2ENSG00000148985Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR019402  Frag1/DRAM/Sfk1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006506 GPI anchor biosynthetic process ISS
 biological_processGO:0006974 cellular response to DNA damage stimulus IMP
 biological_processGO:0008630 intrinsic apoptotic signaling pathway in response to DNA damage IGI
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0042770 signal transduction in response to DNA damage IMP
 biological_processGO:0042771 intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator IGI
 biological_processGO:1902230 negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage IMP
 cellular_componentGO:0000139 Golgi membrane ISS
 cellular_componentGO:0005634 nucleus IMP
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane ISS
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008565 protein transporter activity ISS


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0000480 increased number of ribs "greater than normal numbers of the pairs of bony structures that make up the body wall" [MeSH:National Library of Medicine - Medical Subject Headings, 2003]
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Allelic Composition: Enhotm1.1Butl/Enho+
Genetic Background: B6.Cg-Enhotm1.1Butl

 MP:0011100 complete preweaning lethality "death of all organisms of a given genotype in a population between fertilization and weaning age (Mus: approximately 3-4 weeks of age)" [MGI:csmith]
Show

Allelic Composition: Nphp1tm1.1(KOMP)Vlcg/Nphp1tm1.1(KOMP)Vlcg
Genetic Background: C57BL/6N-Nphp1tm1.1(KOMP)Vlcg/Ucd

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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