ENSG00000151466


Homo sapiens

Features
Gene ID: ENSG00000151466
  
Biological name :SCLT1
  
Synonyms : Q96NL6 / SCLT1 / sodium channel and clathrin linker 1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 4
Strand: -1
Band: q28.2
Gene start: 128864921
Gene end: 129093607
  
Corresponding Affymetrix probe sets: 1569190_at (Human Genome U133 Plus 2.0 Array)   1569495_at (Human Genome U133 Plus 2.0 Array)   236487_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000420861
Ensembl peptide - ENSP00000395292
Ensembl peptide - ENSP00000424029
Ensembl peptide - ENSP00000425315
Ensembl peptide - ENSP00000424304
Ensembl peptide - ENSP00000281142
NCBI entrez gene - 132320     See in Manteia.
OMIM - 611399
RefSeq - XM_017007721
RefSeq - NM_001300898
RefSeq - NM_144643
RefSeq - XM_017007716
RefSeq - XM_017007717
RefSeq - XM_017007718
RefSeq - XM_017007719
RefSeq - XM_017007720
RefSeq - NM_001300897
RefSeq Peptide - NP_653244
RefSeq Peptide - NP_001287826
RefSeq Peptide - NP_001287827
swissprot - D6RBA6
swissprot - Q96NL6
swissprot - D6RBP0
swissprot - D6RDM2
Ensembl - ENSG00000151466
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sclt1ENSDARG00000057248Danio rerio
 Sclt1ENSMUSG00000059834Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
No match


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0045162 clustering of voltage-gated sodium channels IEA
 biological_processGO:0060271 cilium assembly IMP
 biological_processGO:0065009 regulation of molecular function IEA
 biological_processGO:0097711 ciliary basal body-plasma membrane docking TAS
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005813 centrosome IDA
 cellular_componentGO:0005814 centriole IEA
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0070062 extracellular exosome HDA
 cellular_componentGO:0071439 clathrin complex IEA
 cellular_componentGO:0097539 ciliary transition fiber IDA
 molecular_functionGO:0008022 protein C-terminus binding IEA
 molecular_functionGO:0017080 sodium channel regulator activity IEA
 molecular_functionGO:0030276 clathrin binding IEA


Pathways (from Reactome)
Pathway description
Anchoring of the basal body to the plasma membrane


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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