ENSG00000152223


Homo sapiens

Features
Gene ID: ENSG00000152223
  
Biological name :EPG5
  
Synonyms : ectopic P-granules autophagy protein 5 homolog / EPG5 / Q9HCE0
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 18
Strand: -1
Band: q21.1
Gene start: 45847609
Gene end: 45967274
  
Corresponding Affymetrix probe sets: 1563471_at (Human Genome U133 Plus 2.0 Array)   227638_at (Human Genome U133 Plus 2.0 Array)   228453_at (Human Genome U133 Plus 2.0 Array)   232030_at (Human Genome U133 Plus 2.0 Array)   232031_s_at (Human Genome U133 Plus 2.0 Array)   234048_s_at (Human Genome U133 Plus 2.0 Array)   236108_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000466403
Ensembl peptide - ENSP00000467066
Ensembl peptide - ENSP00000467464
Ensembl peptide - ENSP00000282041
Ensembl peptide - ENSP00000466990
NCBI entrez gene - 57724     See in Manteia.
OMIM - 615068
RefSeq - XM_017025893
RefSeq - NM_020964
RefSeq - XM_011526122
RefSeq - XM_017025889
RefSeq - XM_017025890
RefSeq - XM_017025891
RefSeq - XM_017025892
RefSeq Peptide - NP_066015
swissprot - K7ENK5
swissprot - K7ENS1
swissprot - K7EPN4
swissprot - K7EM87
swissprot - Q9HCE0
Ensembl - ENSG00000152223
  
Related genetic diseases (OMIM): 242840 - Vici syndrome, 242840
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 epg5ENSDARG00000059846Danio rerio
 EPG5ENSGALG00000036259Gallus gallus
 Epg5ENSMUSG00000039840Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR029651  Ectopic P granules protein 5


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006914 autophagy IEA
 biological_processGO:0032456 endocytic recycling IEA
 biological_processGO:0097352 autophagosome maturation IEA
 cellular_componentGO:0005737 cytoplasm IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000175 Cleft palate "Cleft palate is a developmental defect of the `palate` (FMA:54549) resulting from a failure of fusion of the palatine processes." [HPO:curators]
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 HP:0000204 Cleft lip "A gap in the `upper lip` (FMA:59817). This is a congenital defect resulting from nonfusion of tissues of the lip during embryonal development." [HPO:probinson]
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 HP:0000218 High palate "Height of the palate more than 2 SD above the mean (objective) or palatal height at the level of the first permanent molar more than twice the height of the teeth (subjective)." [pmid:19125428]
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 HP:0000252 Microcephaly "Microcephaly is a neurodevelopmental disorder in which the circumference of the head is more than two standard deviations smaller than the age- and gender-dependent norm." [HPO:curators]
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 HP:0000316 Hypertelorism 
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 HP:0000347 Mandibular hypoplasia "Underdevelopment of the mandible." [HPO:curators]
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 HP:0000369 Low-set ears "Low-set ears are defined to be set below an arbitrary line drawn between the lateral canthus of the eye and the occipital protruberance." [HPO:curators]
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 HP:0000407 Hearing loss, sensorineural "Hearing loss caused by damage or dysfunction of the auditory nerve (cranial nerve VIII)." [HPO:curators]
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 HP:0000437 Flat nasal tip 
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 HP:0000518 Cataract "A cataract is an opacity or clouding that develops in the crystalline `lens` (FMA:58241) of the eye or in its `capsule` (FMA:58881)." [HPO:probinson]
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 HP:0000519 Congenital cataract "A congenital `cataract` (HP:0000518)." [HPO:probinson]
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 HP:0000601 Hypotelorism 
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 HP:0000639 Nystagmus "Rhythmic, involuntary oscillations of one or both eyes related to abnormality in fixation, conjugate gaze, or vestibular mechanisms." [HPO:curators]
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 HP:0000648 Optic atrophy 
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 HP:0000777 Abnormality of the thymus "Abnormality of the thymus, an organ located in the upper anterior portion of the chest cavity just behind the sternum and whose main function is to provide an environment for T lymphocyte maturation." [HPO:curators]
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 HP:0001010 Hypopigmentation of the skin 
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 HP:0001022 Albinism 
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 HP:0001103 Abnormality of the macula 
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 HP:0001107 Ocular albinism 
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 HP:0001249 Mental retardation 
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001252 Muscular hypotonia "Muscular hypotonia is an abnormally low muscle tone (the amount of tension or resistance to movement in a muscle), often involving reduced muscle strength. Hypotonia is characterized by a diminished resistance to passive stretching." [HPO:curators]
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001270 Motor retardation 
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 HP:0001274 Agenesis of corpus callosum "Absence of the corpus callosum as a result of the failure of the corpus callosum to develop, which can be the result of a failure in any one of the multiple steps of callosal development including cellular proliferation and migration, axonal growth or glial patterning at the midline." [HPO:curators]
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 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
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 HP:0001320 Cerebellar vermis hypoplasia 
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 HP:0001321 Cerebellar hypoplasia 
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 HP:0001387 Joint stiffness "Joint stiffness is a perceived sensation of tightness in a joint or joints when attempting to move them after a period of inactivity. Joint stiffness typically subsides over time." [HPO:curators]
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 HP:0001508 Failure to thrive 
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 HP:0001510 Growth retardation 
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 HP:0001522 Death in infancy 
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 HP:0001635 Congestive heart failure "The presence of an abnormality of cardiac function that is responsible for the failure of the heart to pump blood at a rate that is commensurate with the needs of the tissues or a state in which abnormally elevated filling pressures are required for the heart to do so. Heart failure is frequently related to a defect in myocardial contraction." [HPO:curators]
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 HP:0001638 Cardiomyopathy 
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 HP:0001644 Dilated cardiomyopathy 
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 HP:0001712 Left ventricular hypertrophy 
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 HP:0001941 Acidosis 
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 HP:0001947 Renal tubular acidosis 
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 HP:0002120 Cerebral cortical atrophy 
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 HP:0002205 Recurrent respiratory infections 
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 HP:0002353 EEG abnormalities "Abnormality observed by electroencephalogram (EEG), which is used to record of the brain s spontaneous electrical activity from multiple electrodes placed on the scalp." [HPO:curators]
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 HP:0002360 Sleep disturbances "An abnormality of sleep including such phenomena as 1) insomnia/hypersomnia, 2) non-restorative sleep, 3) sleep schedule disorder, 4) excessive daytime somnolence, 5) sleep apnea, and 6) restlessness." [HPO:curators]
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 HP:0002533 Abnormal posturing 
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 HP:0002718 Recurrent bacterial infections 
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 HP:0002721 Immunodeficiency 
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 HP:0002728 Chronic mucocutaneous candidiasis 
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 HP:0002841 Fungal infections, recurrent 
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 HP:0002965 Cutaneous anergy 
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 HP:0003198 Myopathy 
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 HP:0003244 Penile hypospadias "Location of the urethral opening on the inferior aspect of the penis." [HPO:curators]
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 HP:0003577 Onset at birth 
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 HP:0004315 Decreased IgG level "An abnormally decreased level of immunoglobulin G in blood." [HPO:probinson]
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 HP:0004322 Decreased body height "A height below that which is expected according to age and gender norms. Although there is no universally accepted definition of short stature, many refer to "short stature" as height more than 2 standard deviations below the mean for age and gender (or below the 3rd percentile for age and gender dependent norms)." [HPO:curators]
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 HP:0004429 Recurrent viral infections 
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 HP:0005374 Cellular immunodeficiency 
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 HP:0005407 Decreased number of CD4+ T cells 
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 HP:0005419 Decreased T cell activation 
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 HP:0005599 Hair hypopigmentation 
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 HP:0005999 Ureteral atresia 
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 HP:0007314 White matter neuronal heterotopia 
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 HP:0007703 Abnormal retinal pigmentation 
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 HP:0007894 Hypopigmentation of the fundus 
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 HP:0008348 Reduced IgG levels, particularly the IgG2 subclass "A reduction in immunoglobulin levels affecting particular the IgG2 subclass." [HPO:curators]
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 HP:0008872 Feeding problems in infancy 
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 HP:0010636 Schizencephaly "The presence of a cleft in the cerebral cortex unilaterally or bilaterally, usually located in the frontal area." [HPO:curators]
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 HP:0012110 Hypoplasia of the pons "Underdevelopment of the `pons` (FMA:67943)." [HPO:probinson]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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