ENSG00000152492


Homo sapiens

Features
Gene ID: ENSG00000152492
  
Biological name :CCDC50
  
Synonyms : CCDC50 / coiled-coil domain containing 50 / Q8IVM0
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 3
Strand: 1
Band: q28
Gene start: 191329077
Gene end: 191398670
  
Corresponding Affymetrix probe sets: 225331_at (Human Genome U133 Plus 2.0 Array)   226713_at (Human Genome U133 Plus 2.0 Array)   228693_at (Human Genome U133 Plus 2.0 Array)   235051_at (Human Genome U133 Plus 2.0 Array)   236831_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000376249
Ensembl peptide - ENSP00000376250
NCBI entrez gene - 152137     See in Manteia.
OMIM - 611051
RefSeq - NM_174908
RefSeq - NM_178335
RefSeq Peptide - NP_777568
RefSeq Peptide - NP_848018
swissprot - Q8IVM0
Ensembl - ENSG00000152492
  
Related genetic diseases (OMIM): 607453 - ?Deafness, autosomal dominant 44, 607453
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ccdc50ENSDARG00000105136Danio rerio
 CCDC50ENSGALG00000020813Gallus gallus
 Ccdc50ENSMUSG00000038127Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR029311  Coiled-coil domain-containing protein 50, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007605 sensory perception of sound IMP
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0031625 ubiquitin protein ligase binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000407 Hearing loss, sensorineural "Hearing loss caused by damage or dysfunction of the auditory nerve (cranial nerve VIII)." [HPO:curators]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr