ENSMUSG00000038127


Mus musculus

Features
Gene ID: ENSMUSG00000038127
  
Biological name :Ccdc50
  
Synonyms : Ccdc50 / Coiled-coil domain-containing protein 50 / Q810U5
  
Possible biological names infered from orthology : coiled-coil domain containing 50 / Q8IVM0
  
Species: Mus musculus
  
Chr. number: 16
Strand: 1
Band: B2
Gene start: 27388869
Gene end: 27452218
  
Corresponding Affymetrix probe sets: 10434869 (MoGene1.0st)   1420522_at (Mouse Genome 430 2.0 Array)   1420523_at (Mouse Genome 430 2.0 Array)   1431072_a_at (Mouse Genome 430 2.0 Array)   1433995_s_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000038509
Ensembl peptide - ENSMUSP00000093841
Ensembl peptide - ENSMUSP00000097604
Ensembl peptide - ENSMUSP00000118633
NCBI entrez gene - 67501     See in Manteia.
MGI - MGI:1914751
RefSeq - XM_011246002
RefSeq - NM_001025615
RefSeq - NM_001289436
RefSeq - NM_026202
RefSeq - XM_006522483
RefSeq Peptide - NP_001020786
RefSeq Peptide - NP_001276365
RefSeq Peptide - NP_080478
swissprot - F6UK66
swissprot - Q3TNK7
swissprot - Q810U5
swissprot - A6H6M8
Ensembl - ENSMUSG00000038127
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ccdc50ENSDARG00000105136Danio rerio
 CCDC50ENSGALG00000020813Gallus gallus
 CCDC50ENSG00000152492Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR029311  Coiled-coil domain-containing protein 50, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007605 sensory perception of sound ISO
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005874 microtubule IDA
 molecular_functionGO:0031625 ubiquitin protein ligase binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr