ENSG00000152642


Homo sapiens

Features
Gene ID: ENSG00000152642
  
Biological name :GPD1L
  
Synonyms : glycerol-3-phosphate dehydrogenase 1 like / GPD1L / Q8N335
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 3
Strand: 1
Band: p22.3
Gene start: 32105689
Gene end: 32168713
  
Corresponding Affymetrix probe sets: 212510_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000282541
Ensembl peptide - ENSP00000416518
Ensembl peptide - ENSP00000408770
Ensembl peptide - ENSP00000393861
Ensembl peptide - ENSP00000392199
NCBI entrez gene - 23171     See in Manteia.
OMIM - 611778
RefSeq - NM_015141
RefSeq - XM_006713068
RefSeq Peptide - NP_055956
swissprot - Q8N335
swissprot - F8WC16
swissprot - C9JM46
swissprot - C9JFA7
swissprot - C9K0P5
Ensembl - ENSG00000152642
  
Related genetic diseases (OMIM): 611777 - Brugada syndrome 2, 611777
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 gpd1lENSDARG00000040024Danio rerio
 GPD1LENSGALG00000011481Gallus gallus
 Gpd1lENSMUSG00000050627Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
GPD1 / P21695 / glycerol-3-phosphate dehydrogenase 1ENSG0000016758870


Protein motifs (from Interpro)
Interpro ID Name
 IPR006109  Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal
 IPR006168  Glycerol-3-phosphate dehydrogenase, NAD-dependent
 IPR008927  6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily
 IPR011128  Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal
 IPR013328  6-phosphogluconate dehydrogenase, domain 2
 IPR017751  Glycerol-3-phosphate dehydrogenase, NAD-dependent, eukaryotic
 IPR036291  NAD(P)-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002027 regulation of heart rate IMP
 biological_processGO:0005975 carbohydrate metabolic process IEA
 biological_processGO:0006072 glycerol-3-phosphate metabolic process IEA
 biological_processGO:0006654 phosphatidic acid biosynthetic process TAS
 biological_processGO:0006734 NADH metabolic process IEA
 biological_processGO:0010765 positive regulation of sodium ion transport IMP
 biological_processGO:0019674 NAD metabolic process IMP
 biological_processGO:0033137 negative regulation of peptidyl-serine phosphorylation IMP
 biological_processGO:0046168 glycerol-3-phosphate catabolic process IEA
 biological_processGO:0055114 oxidation-reduction process IEA
 biological_processGO:0060373 regulation of ventricular cardiac muscle cell membrane depolarization IMP
 biological_processGO:0086005 ventricular cardiac muscle cell action potential IMP
 biological_processGO:0090038 negative regulation of protein kinase C signaling IMP
 biological_processGO:2000010 positive regulation of protein localization to cell surface IMP
 biological_processGO:2000649 regulation of sodium ion transmembrane transporter activity IMP
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0005886 plasma membrane IDA
 cellular_componentGO:0009331 glycerol-3-phosphate dehydrogenase complex IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity IEA
 molecular_functionGO:0016491 oxidoreductase activity IEA
 molecular_functionGO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
 molecular_functionGO:0017080 sodium channel regulator activity IMP
 molecular_functionGO:0042803 protein homodimerization activity IEA
 molecular_functionGO:0044325 ion channel binding IPI
 molecular_functionGO:0051287 NAD binding IEA


Pathways (from Reactome)
Pathway description
Synthesis of PA


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0001279 Syncope "Syncope refers to a generalized weakness of muscles with loss of postural tone, inability to stand upright, and loss of consciousness. Once the patient is in a horizontal position, blood flow to the brain is no longer hindered by gravitation and consciousness is regained. Unconsciousness usually lasts for seconds to minutes. Headache and drowsiness (which usually follow seizures) do not follow a syncopal attack. Syncope results from a sudden impairment of brain metabolism usually due to a reduction in cerebral blood flow. This term refers to an abnormally increased disposition to syncope." [HPO:curators]
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 HP:0001645 Sudden cardiac death 
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 HP:0001663 Ventricular fibrillation 
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 HP:0011705 First degree atrioventricular block "Delay of conduction through the atrioventricular node, which is manifested as prolongation of the PR interval in the electrocardiogram (EKG). All atrial impulses reach the ventricles." [DDD:dbrown, HPO:probinson]
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 HP:0011712 Right bundle branch block "A conduction block of the right branch of the bundle of His. This manifests as a prolongation of the QRS complex (greater than 0.12 s) with delayed activation of the right ventricle and terminal delay on the EKG." [DDD:dbrown, HPO:probinson]
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 HP:0012248 Prolonged PR interval "Increased time for the PR interval (beginning of the P wave to the beginning of the QRS complex)." [HPO:probinson]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000152642 GPD1L / Q8N335 / glycerol-3-phosphate dehydrogenase 1 like  / complex






 

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