ENSG00000153574


Homo sapiens

Features
Gene ID: ENSG00000153574
  
Biological name :RPIA
  
Synonyms : P49247 / ribose 5-phosphate isomerase A / RPIA
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 2
Strand: 1
Band: p11.2
Gene start: 88691644
Gene end: 88750935
  
Corresponding Affymetrix probe sets: 212973_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000283646
NCBI entrez gene - 22934     See in Manteia.
OMIM - 180430
RefSeq - NM_144563
RefSeq Peptide - NP_653164
swissprot - P49247
Ensembl - ENSG00000153574
  
Related genetic diseases (OMIM): 608611 - ?Ribose 5-phosphate isomerase deficiency, 608611
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rpiaENSDARG00000056640Danio rerio
 RPIAENSGALG00000015960Gallus gallus
 RpiaENSMUSG00000053604Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR004788  Ribose 5-phosphate isomerase, type A
 IPR020672  Ribose-5-phosphate isomerase, type A, subgroup
 IPR037171  NagB/RpiA transferase-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006014 D-ribose metabolic process IBA
 biological_processGO:0006098 pentose-phosphate shunt TAS
 biological_processGO:0009052 pentose-phosphate shunt, non-oxidative branch IBA
 biological_processGO:0019693 ribose phosphate metabolic process IEA
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IEA
 molecular_functionGO:0004751 ribose-5-phosphate isomerase activity EXP
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0016853 isomerase activity IEA
 molecular_functionGO:0030246 carbohydrate binding IEA
 molecular_functionGO:0042802 identical protein binding IPI
 molecular_functionGO:0048029 monosaccharide binding IEA


Pathways (from Reactome)
Pathway description
RPIA deficiency: failed conversion of R5P to RU5P
RPIA deficiency: failed conversion of RU5P to R5P
Pentose phosphate pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000648 Optic atrophy 
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001251 Ataxia "Ataxia is a nonspecific neurological sign and symptom consisting of gross lack of coordination of muscle movements. Ataxia is caused by dysfunction of one or more parts of the nervous system including the cerebellum, the sensory nervous system, the vestibular system, or the cerebral cortex." [HPO:curators]
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 HP:0001257 Spasticity "A motor disorder characterized by a velocity-dependent increase in tonic stretch reflexes with increased muscle tone, exaggerated (hyperexcitable) tendon reflexes." [HPO:curators]
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001271 Polyneuropathy "A generalized disorder of peripheral nerves." [HPO:curators]
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 HP:0002352 Leukoencephalopathy 
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 HP:0007141 Sensorimotor neuropathy 
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 HP:0025550 Elevated circulating ribitol concentration "An increase above the normal concentration of ribitol in the blood." []
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 HP:0410055 Decreased level of erythritol in urine "A decrease in the level of erythritol in the urine." [PMID:14988808]
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 HP:0410056 Decreased level of erythritol in CSF "A decrease in the level of erythritol in the cerebrospinal fluid." [PMID:14988808]
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 HP:0410057 Increased level of D-threitol in plasma "An increase in the level of D-threitol in the plasma." [PMID:14988808]
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 HP:0410058 Increased level of D-threitol in CSF "An increase in the level of D-threitol in the cerebrospinal fluid." [PMID:14988808]
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 HP:0410059 Increased level of D-threitol in urine "An increase in the level of D-threitol in the urine." [PMID:14988808]
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 HP:0410070 Increased level of ribitol in urine "An increase in the level of ribitol in the urine." [PMID:14988808]
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 HP:0410071 Increased level of ribitol in CSF "An increase in the level of ribitol in the cerebral spinal fluid." [PMID:14988808]
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 HP:0410072 Increased level of ribose in urine "An increase in the level of ribose in the urine." [PMID:14988808]
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 HP:0410073 Increased level of ribose in CSF "An increase in the level of ribose in the cerebrospinal fluid." [PMID:14988808]
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 HP:0410074 Increased level of xylitol in urine "An increase in the level of xylitol in the urine." [PMID:14988808]
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 HP:0410075 Increased level of xylitol in CSF "An increase in the level of xylitol in the cerebrospinal fluid." [PMID:14988808]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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