ENSMUSG00000053604


Mus musculus

Features
Gene ID: ENSMUSG00000053604
  
Biological name :Rpia
  
Synonyms : P47968 / Ribose-5-phosphate isomerase / Rpia
  
Possible biological names infered from orthology : P49247 / ribose 5-phosphate isomerase A
  
Species: Mus musculus
  
Chr. number: 6
Strand: -1
Band: C1
Gene start: 70765720
Gene end: 70792232
  
Corresponding Affymetrix probe sets: 10545255 (MoGene1.0st)   1418337_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000064158
NCBI entrez gene - 19895     See in Manteia.
MGI - MGI:103254
RefSeq - NM_009075
RefSeq Peptide - NP_033101
swissprot - P47968
Ensembl - ENSMUSG00000053604
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rpiaENSDARG00000056640Danio rerio
 RPIAENSGALG00000015960Gallus gallus
 RPIAENSG00000153574Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR004788  Ribose 5-phosphate isomerase, type A
 IPR020672  Ribose-5-phosphate isomerase, type A, subgroup
 IPR037171  NagB/RpiA transferase-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006014 D-ribose metabolic process IBA
 biological_processGO:0006098 pentose-phosphate shunt IEA
 biological_processGO:0009052 pentose-phosphate shunt, non-oxidative branch IBA
 biological_processGO:0019693 ribose phosphate metabolic process IEA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IEA
 molecular_functionGO:0004751 ribose-5-phosphate isomerase activity ISO
 molecular_functionGO:0016853 isomerase activity IEA
 molecular_functionGO:0030246 carbohydrate binding IEA
 molecular_functionGO:0042802 identical protein binding IEA
 molecular_functionGO:0048029 monosaccharide binding IEA


Pathways (from Reactome)
Pathway description
Pentose phosphate pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0000195 hypocalcemia "subnormal concentrations of calcium ions in the circulating blood " [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8]
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Allelic Composition: Xbp1tm1a(EUCOMM)Wtsi/Xbp1+
Genetic Background: C57BL/6N-Xbp1tm1a(EUCOMM)Wtsi/Ics

 MP:0011100 complete preweaning lethality "death of all organisms of a given genotype in a population between fertilization and weaning age (Mus: approximately 3-4 weeks of age)" [MGI:csmith]
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Allelic Composition: Rpgrip1ltm1a(EUCOMM)Wtsi/Rpgrip1l+
Genetic Background: C57BL/6N-Rpgrip1ltm1a(EUCOMM)Wtsi/Wtsi

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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