ENSG00000158079


Homo sapiens

Features
Gene ID: ENSG00000158079
  
Biological name :PTPDC1
  
Synonyms : A2A3K4 / protein tyrosine phosphatase domain containing 1 / PTPDC1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 9
Strand: 1
Band: q22.32
Gene start: 94030794
Gene end: 94109856
  
Corresponding Affymetrix probe sets: 229517_at (Human Genome U133 Plus 2.0 Array)   238841_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000364509
Ensembl peptide - ENSP00000477817
Ensembl peptide - ENSP00000288976
NCBI entrez gene - 138639     See in Manteia.
RefSeq - XM_017014282
RefSeq - NM_177995
RefSeq - XM_005251711
RefSeq - XM_011518240
RefSeq - XM_011518241
RefSeq - XM_017014280
RefSeq - XM_017014281
RefSeq - NM_001253829
RefSeq - NM_001253830
RefSeq - NM_152422
RefSeq Peptide - NP_001240759
RefSeq Peptide - NP_689635
RefSeq Peptide - NP_818931
RefSeq Peptide - NP_001240758
swissprot - A2A3K4
swissprot - A0A087WTF0
Ensembl - ENSG00000158079
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ptpdc1aENSDARG00000061656Danio rerio
 ptpdc1bENSDARG00000058873Danio rerio
 PTPDC1ENSGALG00000005128Gallus gallus
 Ptpdc1ENSMUSG00000038042Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000340  Dual specificity phosphatase, catalytic domain
 IPR000387  Tyrosine specific protein phosphatases domain
 IPR003595  Protein-tyrosine phosphatase, catalytic
 IPR016130  Protein-tyrosine phosphatase, active site
 IPR020422  Dual specificity protein phosphatase domain
 IPR029021  Protein-tyrosine phosphatase-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006470 protein dephosphorylation IEA
 biological_processGO:0007224 smoothened signaling pathway IEA
 biological_processGO:0016311 dephosphorylation IEA
 biological_processGO:0030030 cell projection organization IEA
 biological_processGO:0035335 peptidyl-tyrosine dephosphorylation IEA
 biological_processGO:0060271 cilium assembly IEA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0004721 phosphoprotein phosphatase activity IEA
 molecular_functionGO:0004725 protein tyrosine phosphatase activity IEA
 molecular_functionGO:0008138 protein tyrosine/serine/threonine phosphatase activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0016791 phosphatase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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