ENSG00000160213


Homo sapiens

Features
Gene ID: ENSG00000160213
  
Biological name :CSTB
  
Synonyms : CSTB / cystatin B / P04080
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 21
Strand: -1
Band: q22.3
Gene start: 43772511
Gene end: 43776445
  
Corresponding Affymetrix probe sets: 201201_at (Human Genome U133 Plus 2.0 Array)   236449_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000291568
Ensembl peptide - ENSP00000492672
Ensembl peptide - ENSP00000492123
NCBI entrez gene - 1476     See in Manteia.
OMIM - 601145
RefSeq - NM_000100
RefSeq Peptide - NP_000091
swissprot - A0A1W2PQG6
swissprot - A0A1W2PS52
swissprot - P04080
swissprot - Q76LA1
Ensembl - ENSG00000160213
  
Related genetic diseases (OMIM): 254800 - Epilepsy, progressive myoclonic 1A (Unverricht and Lundborg), 254800
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 cst14a.1ENSDARG00000028164Danio rerio
 cst14a.2ENSDARG00000045352Danio rerio
 cst14b.1ENSDARG00000117133Danio rerio
 CSTBENSGALG00000014410Gallus gallus
 CstbENSMUSG00000005054Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CSTA / P01040 / cystatin AENSG0000012155252


Protein motifs (from Interpro)
Interpro ID Name
 IPR000010  Cystatin domain
 IPR001713  Proteinase inhibitor I25A, stefin
 IPR018073  Proteinase inhibitor I25, cystatin, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008344 adult locomotory behavior IEA
 biological_processGO:0010466 negative regulation of peptidase activity IDA
 biological_processGO:0010951 negative regulation of endopeptidase activity IEA
 biological_processGO:0043312 neutrophil degranulation TAS
 biological_processGO:0045861 negative regulation of proteolysis IDA
 cellular_componentGO:0005576 extracellular region TAS
 cellular_componentGO:0005615 extracellular space IDA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005730 nucleolus IDA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IDA
 cellular_componentGO:0034774 secretory granule lumen TAS
 cellular_componentGO:0070062 extracellular exosome HDA
 cellular_componentGO:1904724 tertiary granule lumen TAS
 cellular_componentGO:1904813 ficolin-1-rich granule lumen TAS
 molecular_functionGO:0002020 protease binding IPI
 molecular_functionGO:0003723 RNA binding HDA
 molecular_functionGO:0004866 endopeptidase inhibitor activity IEA
 molecular_functionGO:0004869 cysteine-type endopeptidase inhibitor activity IEA
 molecular_functionGO:0030414 peptidase inhibitor activity IEA


Pathways (from Reactome)
Pathway description
Neutrophil degranulation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000726 Dementia 
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 HP:0000992 Photosensitivity "An increased sensitivity of the skin to light. Photosensitivity may result in a rash upon exposure to the sun (which is known as photodermatosis). Photosensitivity can be diagnosed by phototests in which light is shone on small areas of skin." [HPO:curators]
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 HP:0001249 Mental retardation 
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 HP:0001251 Ataxia "Ataxia is a nonspecific neurological sign and symptom consisting of gross lack of coordination of muscle movements. Ataxia is caused by dysfunction of one or more parts of the nervous system including the cerebellum, the sensory nervous system, the vestibular system, or the cerebral cortex." [HPO:curators]
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 HP:0001260 Dysarthria "Dysarthric speech is a general description referring to a neurological speech disorder characterized by poor articulation. Depending on the involved neurological structures, dysarthria may be further classified as spastic, flaccid, ataxic, hyperkinetic and hypokinetic, or mixed." [HPO:curators]
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 HP:0001268 Mental deterioration 
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 HP:0001336 Myoclonus "Very brief, involuntary random muscular contractions occurring at rest, in response to sensory stimuli, or accompanying voluntary movements." [HPO:curators]
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 HP:0002069 Generalized tonic-clonic seizures "Generalized tonic-clonic seizures are `generalized seizures` (HP:0002197) in which the patient suddenly loses conciousness, the eyes roll back, and the entire body musculature undergoes tonic contractions. In the clonic phase of the seizure, there are rhythmic contractions of the musculature alternating with relaxation of all muscle groups. Loss of sphincter control during the seizure is common. This form of seizure was formerly commonly called grand mal seizure." [HPO:curators]
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 HP:0002070 Limb ataxia 
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 HP:0002080 Intention tremor "An oscillatory cerebellar ataxia that tends to be absent when the limbs are inactive and during the first part of voluntary movement but worsening as the movement continues and greater precision is required (e.g., in touching a target such as the patient s nose or a physician s finger)." [HPO:curators]
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 HP:0002121 Absence seizures "Recurrent absence seizures are `generalized seizures` (HP:0002197) that are characterized by a sudden cessation of motor activity and by a blank facial expression with flickering of the eyelids. There is no convulsive muscular activity or loss of postural control." [HPO:probinson]
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 HP:0002392 EEG shows 3-4-Hz spike and multispike slow wave complexes 
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 HP:0007000 Morning myoclonic jerks 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr