ENSG00000161981


Homo sapiens

Features
Gene ID: ENSG00000161981
  
Biological name :SNRNP25
  
Synonyms : Q9BV90 / small nuclear ribonucleoprotein U11/U12 subunit 25 / SNRNP25
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 16
Strand: 1
Band: p13.3
Gene start: 53010
Gene end: 57669
  
Corresponding Affymetrix probe sets: 218493_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000380974
Ensembl peptide - ENSP00000391289
Ensembl peptide - ENSP00000293861
Ensembl peptide - ENSP00000372482
NCBI entrez gene - 79622     See in Manteia.
RefSeq - NM_024571
RefSeq Peptide - NP_078847
swissprot - B8ZZ06
swissprot - H7BYR9
swissprot - Q4TT61
swissprot - Q9BV90
Ensembl - ENSG00000161981
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 snrnp25ENSDARG00000020363Danio rerio
 SNRNP25ENSGALG00000026559Gallus gallus
 Q8VIK1ENSMUSG00000040767Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000626  Ubiquitin domain
 IPR029071  Ubiquitin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000398 mRNA splicing, via spliceosome TAS
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0008380 RNA splicing IC
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0005681 spliceosomal complex IEA
 cellular_componentGO:0005689 U12-type spliceosomal complex IDA
 cellular_componentGO:0005829 cytosol IDA
 cellular_componentGO:0045171 intercellular bridge IDA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
mRNA Splicing - Minor Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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