ENSGALG00000026559


Gallus gallus

Features
Gene ID: ENSGALG00000026559
  
Biological name :SNRNP25
  
Synonyms : small nuclear ribonucleoprotein U11/U12 subunit 25 / SNRNP25
  
Possible biological names infered from orthology : Q8VIK1 / Q9BV90 / U11/U12 small nuclear ribonucleoprotein 25 kDa protein
  
Species: Gallus gallus
  
Chr. number: 14
Strand: 1
Band:
Gene start: 12037989
Gene end: 12040508
  
Corresponding Affymetrix probe sets: Gga.7593.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000042421
NCBI entrez gene - 425933     See in Manteia.
RefSeq - XM_015294611
swissprot - R4GJU5
Ensembl - ENSGALG00000026559
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 snrnp25ENSDARG00000020363Danio rerio
 Q9BV90ENSG00000161981Homo sapiens
 Q8VIK1ENSMUSG00000040767Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000626  Ubiquitin domain
 IPR029071  Ubiquitin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005689 U12-type spliceosomal complex IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0045171 intercellular bridge IEA


Pathways (from Reactome)
Pathway description
mRNA Splicing - Minor Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr