ENSG00000162129


Homo sapiens

Features
Gene ID: ENSG00000162129
  
Biological name :CLPB
  
Synonyms : CLPB / ClpB homolog, mitochondrial AAA ATPase chaperonin / Q9H078
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 11
Strand: -1
Band: q13.4
Gene start: 72285495
Gene end: 72434680
  
Corresponding Affymetrix probe sets: 221845_s_at (Human Genome U133 Plus 2.0 Array)   224510_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000495167
Ensembl peptide - ENSP00000495421
Ensembl peptide - ENSP00000496231
Ensembl peptide - ENSP00000294053
Ensembl peptide - ENSP00000340385
Ensembl peptide - ENSP00000407296
Ensembl peptide - ENSP00000439746
Ensembl peptide - ENSP00000440423
Ensembl peptide - ENSP00000441518
Ensembl peptide - ENSP00000441804
Ensembl peptide - ENSP00000442651
Ensembl peptide - ENSP00000443822
Ensembl peptide - ENSP00000445180
Ensembl peptide - ENSP00000445327
Ensembl peptide - ENSP00000494594
NCBI entrez gene - 81570     See in Manteia.
OMIM - 616254
RefSeq - XM_005274320
RefSeq - NM_001258392
RefSeq - NM_001258393
RefSeq - NM_001258394
RefSeq - NM_030813
RefSeq Peptide - NP_001245323
RefSeq Peptide - NP_110440
RefSeq Peptide - NP_001245321
RefSeq Peptide - NP_001245322
swissprot - F5GX99
swissprot - F5H392
swissprot - F5H7A5
swissprot - H0YG50
swissprot - F6SS08
swissprot - H0YGM0
swissprot - Q9H078
swissprot - A0A140VK11
Ensembl - ENSG00000162129
  
Related genetic diseases (OMIM): 616271 - 3-methylglutaconic aciduria, type VII, with cataracts, neurologic involvement and neutropenia, 616271
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 clpbENSDARG00000090232Danio rerio
 FO904873.1ENSDARG00000088463Danio rerio
 ClpbENSMUSG00000001829Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001270  ClpA/B family
 IPR002110  Ankyrin repeat
 IPR003593  AAA+ ATPase domain
 IPR003959  ATPase, AAA-type, core
 IPR019489  Clp ATPase, C-terminal
 IPR020683  Ankyrin repeat-containing domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR036770  Ankyrin repeat-containing domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0034605 cellular response to heat IDA
 cellular_componentGO:0005575 cellular_component ND
 cellular_componentGO:0005739 mitochondrion IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0016887 ATPase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000252 Microcephaly "Microcephaly is a neurodevelopmental disorder in which the circumference of the head is more than two standard deviations smaller than the age- and gender-dependent norm." [HPO:curators]
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 HP:0000518 Cataract "A cataract is an opacity or clouding that develops in the crystalline `lens` (FMA:58241) of the eye or in its `capsule` (FMA:58881)." [HPO:probinson]
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 HP:0001249 Mental retardation 
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001257 Spasticity "A motor disorder characterized by a velocity-dependent increase in tonic stretch reflexes with increased muscle tone, exaggerated (hyperexcitable) tendon reflexes." [HPO:curators]
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001272 Cerebellar atrophy 
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 HP:0001319 Neonatal hypotonia "Muscular hypotonia (abnormally low muscle tone) manifesting in the neonatal period." [HPO:curators]
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 HP:0001510 Growth retardation 
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 HP:0001875 Neutropenia 
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 HP:0001999 Facial dysmorphism 
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 HP:0002059 Cerebral atrophy 
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 HP:0002071 Extrapyramidal signs 
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 HP:0002376 Developmental regression 
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 HP:0002719 Recurrent infections 
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 HP:0003577 Onset at birth 
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 HP:0003676 Progressive disorder 
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 HP:0003812 Phenotypic variability 
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 HP:0007256 Mild pyramidal signs 
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 HP:0011968 Feeding difficulties "Impaired ability to eat related to problems gathering food and getting ready to suck, chew, or swallow it." [ISCA:eriggs]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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