ENSMUSG00000001829


Mus musculus

Features
Gene ID: ENSMUSG00000001829
  
Biological name :Clpb
  
Synonyms : Caseinolytic peptidase B protein homolog / Clpb / Q60649
  
Possible biological names infered from orthology : ClpB homolog, mitochondrial AAA ATPase chaperonin / Q9H078
  
Species: Mus musculus
  
Chr. number: 7
Strand: 1
Band: E2
Gene start: 101663633
Gene end: 101795506
  
Corresponding Affymetrix probe sets: 10555550 (MoGene1.0st)   1416541_at (Mouse Genome 430 2.0 Array)   1454168_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000148062
Ensembl peptide - ENSMUSP00000001884
Ensembl peptide - ENSMUSP00000102611
Ensembl peptide - ENSMUSP00000121861
NCBI entrez gene - 20480     See in Manteia.
MGI - MGI:1100517
RefSeq - XM_011241703
RefSeq - NM_009191
RefSeq - XM_006507488
RefSeq - XM_006507489
RefSeq - XM_011241702
RefSeq Peptide - NP_033217
swissprot - Q60649
swissprot - Q8CCN6
swissprot - E9PY58
swissprot - D6RIQ2
swissprot - Q3URM1
Ensembl - ENSMUSG00000001829
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 clpbENSDARG00000090232Danio rerio
 FO904873.1ENSDARG00000088463Danio rerio
 CLPBENSG00000162129Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001270  ClpA/B family
 IPR002110  Ankyrin repeat
 IPR003593  AAA+ ATPase domain
 IPR003959  ATPase, AAA-type, core
 IPR019489  Clp ATPase, C-terminal
 IPR020683  Ankyrin repeat-containing domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR036770  Ankyrin repeat-containing domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0034605 cellular response to heat IEA
 cellular_componentGO:0005739 mitochondrion IDA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0016887 ATPase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr