ENSG00000162244


Homo sapiens

Features
Gene ID: ENSG00000162244
  
Biological name :RPL29
  
Synonyms : P47914 / ribosomal protein L29 / RPL29
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 3
Strand: -1
Band: p21.2
Gene start: 51993600
Gene end: 51995942
  
Corresponding Affymetrix probe sets: 200823_x_at (Human Genome U133 Plus 2.0 Array)   213969_x_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000418868
Ensembl peptide - ENSP00000419333
Ensembl peptide - ENSP00000420673
Ensembl peptide - ENSP00000294189
Ensembl peptide - ENSP00000417048
Ensembl peptide - ENSP00000418153
Ensembl peptide - ENSP00000418346
Ensembl peptide - ENSP00000418839
NCBI entrez gene - 6159     See in Manteia.
OMIM - 601832
RefSeq - NM_000992
RefSeq Peptide - NP_000983
swissprot - C9IYI4
swissprot - F8WF43
swissprot - P47914
Ensembl - ENSG00000162244
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rpl29ENSDARG00000077717Danio rerio
 RPL29ENSGALG00000026978Gallus gallus
 Gm17669ENSMUSG00000091695Mus musculus
 Gm3550ENSMUSG00000078240Mus musculus
 Rpl29ENSMUSG00000048758Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002673  Ribosomal protein L29e


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay TAS
 biological_processGO:0002181 cytoplasmic translation IBA
 biological_processGO:0006364 rRNA processing TAS
 biological_processGO:0006412 translation IEA
 biological_processGO:0006413 translational initiation TAS
 biological_processGO:0006614 SRP-dependent cotranslational protein targeting to membrane TAS
 biological_processGO:0007566 embryo implantation TAS
 biological_processGO:0019083 viral transcription TAS
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0005840 ribosome IEA
 cellular_componentGO:0016020 membrane HDA
 cellular_componentGO:0022625 cytosolic large ribosomal subunit TAS
 molecular_functionGO:0003723 RNA binding TAS
 molecular_functionGO:0003735 structural constituent of ribosome IEA
 molecular_functionGO:0008201 heparin binding TAS
 molecular_functionGO:0045296 cadherin binding IDA


Pathways (from Reactome)
Pathway description
L13a-mediated translational silencing of Ceruloplasmin expression
Peptide chain elongation
SRP-dependent cotranslational protein targeting to membrane
Viral mRNA Translation
Selenocysteine synthesis
Major pathway of rRNA processing in the nucleolus and cytosol
Formation of a pool of free 40S subunits
GTP hydrolysis and joining of the 60S ribosomal subunit
Eukaryotic Translation Termination
Regulation of expression of SLITs and ROBOs
Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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