ENSMUSG00000048758


Mus musculus

Features
Gene ID: ENSMUSG00000048758
  
Biological name :Rpl29
  
Synonyms : 60S ribosomal protein L29 / P47915 / Rpl29
  
Possible biological names infered from orthology : P47914 / ribosomal protein L29
  
Species: Mus musculus
  
Chr. number: 9
Strand: 1
Band: F1
Gene start: 106429454
Gene end: 106431568
  
Corresponding Affymetrix probe sets: 10345909 (MoGene1.0st)   10350044 (MoGene1.0st)   10360578 (MoGene1.0st)   10366522 (MoGene1.0st)   10394558 (MoGene1.0st)   10402316 (MoGene1.0st)   10403346 (MoGene1.0st)   10426500 (MoGene1.0st)   10430743 (MoGene1.0st)   10451549 (MoGene1.0st)   10454733 (MoGene1.0st)   10457922 (MoGene1.0st)   10472197 (MoGene1.0st)   10476441 (MoGene1.0st)   10489303 (MoGene1.0st)   10490824 (MoGene1.0st)   10498117 (MoGene1.0st)   10505090 (MoGene1.0st)   10514464 (MoGene1.0st)   10518356 (MoGene1.0st)   10533023 (MoGene1.0st)   10535626 (MoGene1.0st)   10544855 (MoGene1.0st)   10547924 (MoGene1.0st)   10562647 (MoGene1.0st)   10571205 (MoGene1.0st)   10571310 (MoGene1.0st)   10583142 (MoGene1.0st)   10588499 (MoGene1.0st)   10603177 (MoGene1.0st)   1436046_x_at (Mouse Genome 430 2.0 Array)   1448846_a_at (Mouse Genome 430 2.0 Array)   1454627_a_at (Mouse Genome 430 2.0 Array)   1455348_x_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000096592
Ensembl peptide - ENSMUSP00000117834
Ensembl peptide - ENSMUSP00000150846
Ensembl peptide - ENSMUSP00000150339
Ensembl peptide - ENSMUSP00000149722
Ensembl peptide - ENSMUSP00000080203
NCBI entrez gene - 19944     See in Manteia.
NCBI entrez gene - 666642     See in Manteia.
MGI - MGI:99687
RefSeq - XM_006511660
RefSeq - NM_001324533
RefSeq - NM_001324534
RefSeq - NM_009082
RefSeq Peptide - NP_001311462
RefSeq Peptide - NP_001311463
RefSeq Peptide - NP_033108
swissprot - A0A1L1STJ3
swissprot - Q5M8M8
swissprot - P47915
swissprot - A0A1L1SUN1
swissprot - A0A1L1SS27
Ensembl - ENSMUSG00000048758
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rpl29ENSDARG00000077717Danio rerio
 RPL29ENSGALG00000026978Gallus gallus
 RPL29ENSG00000162244Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Gm3550 / RPL29* / P47914* / ribosomal protein L29*ENSMUSG0000007824097
Gm17669 / RPL29* / P47914* / ribosomal protein L29*ENSMUSG0000009169586


Protein motifs (from Interpro)
Interpro ID Name
 IPR002673  Ribosomal protein L29e


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002181 cytoplasmic translation IBA
 biological_processGO:0006412 translation IEA
 biological_processGO:0008283 cell proliferation IMP
 biological_processGO:0031589 cell-substrate adhesion IDA
 biological_processGO:0035264 multicellular organism growth IMP
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005840 ribosome IEA
 cellular_componentGO:0019898 extrinsic component of membrane IDA
 cellular_componentGO:0022625 cytosolic large ribosomal subunit IBA
 cellular_componentGO:0022626 cytosolic ribosome IDA
 cellular_componentGO:0042788 polysomal ribosome IDA
 molecular_functionGO:0003735 structural constituent of ribosome IEA
 molecular_functionGO:0008201 heparin binding IDA


Pathways (from Reactome)
Pathway description
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0000060 delayed bone ossification "late onset of the formation of bone" [J:40203]
Show

Allelic Composition: Rpl29tm1Udel/Rpl29tm1Udel
Genetic Background: 129S6/SvEvTac-Rpl29tm1Udel

 MP:0001262 decreased body weight "lower than normal average weight " [J:61295]
Show

Allelic Composition: Acvr1tm1.1Vk/Acvr1tm1.1Vk
Genetic Background: involves: 129S1/Sv * 129X1/SvJ * C57BL/6J

Allelic Composition: Rpl29tm1Udel/Rpl29tm1Udel
Genetic Background: 129S6/SvEvTac-Rpl29tm1Udel

Allelic Composition: Rpl29tm2Udel/Rpl29tm2Udel
Genetic Background: involves: 129S6/SvEvTac * C57BL/6J

 MP:0001732 postnatal growth retardation "slow or limited development after birth " [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
Show

Allelic Composition: Acvr1tm1.1Vk/Acvr1tm1.1Vk
Genetic Background: involves: 129S1/Sv * 129X1/SvJ * C57BL/6J

Allelic Composition: Rpl29tm1Udel/Rpl29tm1Udel
Genetic Background: 129S6/SvEvTac-Rpl29tm1Udel

Allelic Composition: Rpl29tm2Udel/Rpl29tm2Udel
Genetic Background: involves: 129S6/SvEvTac * C57BL/6J

 MP:0001938 delayed sexual maturation "immaturity of the sexual organs at a given age" [J:61190]
Show

Allelic Composition: Acvr1tm1.1Vk/Acvr1tm1.1Vk
Genetic Background: involves: 129S1/Sv * 129X1/SvJ * C57BL/6J

 MP:0003077 abnormal cell cycle "failure to progress or abnormal progression through the stages of of the cell cycle" [smb:Susan M. Bello, Mouse Genome Informatics Curator, J:91266]
Show

Allelic Composition: Rpl29tm1Udel/Rpl29tm1Udel
Genetic Background: 129S6/SvEvTac-Rpl29tm1Udel

 MP:0003984 embryonic growth retardation "slow or limited development before birth" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Acvr1tm1.1Vk/Acvr1tm1.1Vk
Genetic Background: involves: 129S1/Sv * 129X1/SvJ * C57BL/6J

Allelic Composition: Rpl29tm1Udel/Rpl29tm1Udel
Genetic Background: 129S6/SvEvTac-Rpl29tm1Udel

 MP:0011110 partial preweaning lethality "the appearance of lower than Mendelian ratios of organisms of a given genotype due to death of some, but not all of the organisms between fertilization and weaning age (Mus: approximately 3-4 weeks of age)" [MGI:csmith]
Show

Allelic Composition: Acvr1tm1.1Vk/Acvr1tm1.1Vk
Genetic Background: involves: 129S1/Sv * 129X1/SvJ * C57BL/6J

Allelic Composition: Rpl29tm1Udel/Rpl29tm1Udel
Genetic Background: 129S6/SvEvTac-Rpl29tm1Udel

Allelic Composition: Rpl29tm2Udel/Rpl29tm2Udel
Genetic Background: involves: 129S6/SvEvTac * C57BL/6J

 MP:0011704 decreased fibroblast proliferation "reduction in the expansion rate of a fibroblast cell population by cell division" [MGI:csmith]
Show

Allelic Composition: Rpl29tm1Udel/Rpl29tm1Udel
Genetic Background: 129S6/SvEvTac-Rpl29tm1Udel

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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