ENSG00000163159


Homo sapiens

Features
Gene ID: ENSG00000163159
  
Biological name :VPS72
  
Synonyms : Q15906 / vacuolar protein sorting 72 homolog / VPS72
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: -1
Band: q21.3
Gene start: 151169987
Gene end: 151195321
  
Corresponding Affymetrix probe sets: 202261_at (Human Genome U133 Plus 2.0 Array)   223762_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000491718
Ensembl peptide - ENSP00000346464
Ensembl peptide - ENSP00000357887
NCBI entrez gene - 6944     See in Manteia.
OMIM - 600607
RefSeq - XM_017002205
RefSeq - NM_001271087
RefSeq - NM_001271088
RefSeq - NM_005997
RefSeq Peptide - NP_001258016
RefSeq Peptide - NP_001258017
RefSeq Peptide - NP_005988
swissprot - Q15906
swissprot - A0A1W2PPT2
Ensembl - ENSG00000163159
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 vps72ENSDARG00000063718Danio rerio
 VPS72ENSDARG00000088567Danio rerio
 VPS72ENSGALG00000000793Gallus gallus
 Vps72ENSMUSG00000008958Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR008895  Vps72/YL1 family
 IPR013272  Vps72/YL1, C-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II TAS
 biological_processGO:0006325 chromatin organization IEA
 biological_processGO:0006338 chromatin remodeling IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0035019 somatic stem cell population maintenance IEA
 biological_processGO:0043486 histone exchange IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0016607 nuclear speck IDA
 cellular_componentGO:0032991 protein-containing complex IDA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0042393 histone binding IPI


Pathways (from Reactome)
Pathway description
HATs acetylate histones


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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