ENSG00000163931


Homo sapiens

Features
Gene ID: ENSG00000163931
  
Biological name :TKT
  
Synonyms : P29401 / TKT / transketolase
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 3
Strand: -1
Band: p21.1
Gene start: 53224707
Gene end: 53256052
  
Corresponding Affymetrix probe sets: 208699_x_at (Human Genome U133 Plus 2.0 Array)   208700_s_at (Human Genome U133 Plus 2.0 Array)   228205_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000417312
Ensembl peptide - ENSP00000413503
Ensembl peptide - ENSP00000417773
Ensembl peptide - ENSP00000418340
Ensembl peptide - ENSP00000296289
Ensembl peptide - ENSP00000391481
Ensembl peptide - ENSP00000405455
NCBI entrez gene - 7086     See in Manteia.
OMIM - 606781
RefSeq - XM_011534055
RefSeq - NM_001064
RefSeq - NM_001135055
RefSeq - NM_001258028
RefSeq - XM_011534054
RefSeq Peptide - NP_001128527
RefSeq Peptide - NP_001244957
RefSeq Peptide - NP_001055
swissprot - F8W888
swissprot - F8WAX4
swissprot - V9HWD9
swissprot - P29401
swissprot - A0A0B4J1R6
swissprot - E9PFF2
Ensembl - ENSG00000163931
  
Related genetic diseases (OMIM): 617044 - Short stature, developmental delay, and congenital heart defects, 617044
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tktaENSDARG00000029689Danio rerio
 TKTENSGALG00000005309Gallus gallus
 TktENSMUSG00000021957Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TKTL2 / Q9H0I9 / transketolase like 2ENSG0000015100566
TKTL1 / P51854 / transketolase like 1ENSG0000000735058


Protein motifs (from Interpro)
Interpro ID Name
 IPR005474  Transketolase, N-terminal
 IPR005475  Transketolase-like, pyrimidine-binding domain
 IPR009014  Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II
 IPR020826  Transketolase binding site
 IPR029061  Thiamin diphosphate-binding fold
 IPR033248  Transketolase, C-terminal domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0005999 xylulose biosynthetic process TAS
 biological_processGO:0006098 pentose-phosphate shunt TAS
 biological_processGO:0008152 metabolic process IEA
 biological_processGO:0009052 pentose-phosphate shunt, non-oxidative branch NAS
 biological_processGO:0040008 regulation of growth IEA
 biological_processGO:0046166 glyceraldehyde-3-phosphate biosynthetic process IDA
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005777 peroxisome ISS
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0016604 nuclear body IDA
 cellular_componentGO:0016607 nuclear speck IDA
 cellular_componentGO:0031982 vesicle HDA
 cellular_componentGO:0043209 myelin sheath IEA
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0004802 transketolase activity EXP
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0042803 protein homodimerization activity IDA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0048037 cofactor binding IDA


Pathways (from Reactome)
Pathway description
Insulin effects increased synthesis of Xylulose-5-Phosphate
Pentose phosphate pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000554 Uveitis "Inflammation of one or all portions of the uveal tract." [HPO:curators]
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 HP:0000722 Obsessive-compulsive disorder 
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 HP:0000733 Stereotyped, repetitive behaviour 
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 HP:0001249 Mental retardation 
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 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
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 HP:0001629 Ventricular septal defect "A hole between the two bottom chambers (ventricles) of the heart. The defect is centered around the most superior aspect of the ventricular septum." [HPO:curators]
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 HP:0001643 Patent ductus arteriosus 
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 HP:0001655 Patent foramen ovale 
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 HP:0003508 Proportionate short stature "Short stature affecting the trunk and the limbs proportionately." [HPO:curators]
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 HP:0007018 Attention deficit hyperactivity disorder "Attention deficit hyperactivity disorder (ADHD) manifests at age 2-3 years or by first grade at the latest. The main symptoms are distractibility, impulsivity, hyperactivity, and often trouble organizing tasks and projects, difficulty going to sleep, and social problems from being aggressive, loud, or impatient." [HPO:curators]
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 HP:0100716 Autoagression "Aggression towards oneself." [HPO:sdoelken]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000163931 TKT / P29401 / transketolase  / complex






 

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