ENSG00000164048


Homo sapiens

Features
Gene ID: ENSG00000164048
  
Biological name :ZNF589
  
Synonyms : Q86UQ0 / zinc finger protein 589 / ZNF589
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 3
Strand: 1
Band: p21.31
Gene start: 48241100
Gene end: 48299253
  
Corresponding Affymetrix probe sets: 1569108_a_at (Human Genome U133 Plus 2.0 Array)   210061_at (Human Genome U133 Plus 2.0 Array)   210062_s_at (Human Genome U133 Plus 2.0 Array)   219968_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000392719
Ensembl peptide - ENSP00000408719
Ensembl peptide - ENSP00000404592
Ensembl peptide - ENSP00000404398
Ensembl peptide - ENSP00000401106
Ensembl peptide - ENSP00000346729
NCBI entrez gene - 51385     See in Manteia.
OMIM - 616702
RefSeq - XM_017006579
RefSeq - NM_016089
RefSeq - XM_017006575
RefSeq - XM_017006576
RefSeq Peptide - NP_057173
swissprot - C9JGA6
swissprot - Q86UQ0
swissprot - B4DQF9
swissprot - C9J1J1
swissprot - F8VZ09
Ensembl - ENSG00000164048
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
HKR1 / P10072 / HKR1, GLI-Kruppel zinc finger family memberENSG0000018166641
P52736 / ZNF133 / zinc finger protein 133ENSG0000012584640
PRDM9 / Q9NQV7 / PR/SET domain 9ENSG0000016425637
Q14929 / ZNF169 / zinc finger protein 169ENSG0000017578736
Q9Y3M9 / ZNF337 / zinc finger protein 337ENSG0000013068434
Q6P1L6 / ZNF343 / zinc finger protein 343ENSG0000008887632


Protein motifs (from Interpro)
Interpro ID Name
 IPR001909  Krueppel-associated box
 IPR013087  Zinc finger C2H2-type
 IPR036051  KRAB domain superfamily
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IDA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IDA
 molecular_functionGO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding IMP
 molecular_functionGO:0001227 transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific DNA binding IMP
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Generic Transcription Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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