ENSG00000166012


Homo sapiens

Features
Gene ID: ENSG00000166012
  
Biological name :TAF1D
  
Synonyms : Q9H5J8 / TAF1D / TATA-box binding protein associated factor, RNA polymerase I subunit D
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 11
Strand: -1
Band: q21
Gene start: 93729948
Gene end: 93784391
  
Corresponding Affymetrix probe sets: 218750_at (Human Genome U133 Plus 2.0 Array)   221580_s_at (Human Genome U133 Plus 2.0 Array)   222728_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000432852
Ensembl peptide - ENSP00000433119
Ensembl peptide - ENSP00000446311
Ensembl peptide - ENSP00000441633
Ensembl peptide - ENSP00000435304
Ensembl peptide - ENSP00000435087
Ensembl peptide - ENSP00000314971
Ensembl peptide - ENSP00000376944
Ensembl peptide - ENSP00000410409
Ensembl peptide - ENSP00000431570
NCBI entrez gene - 79101     See in Manteia.
OMIM - 612823
RefSeq - NM_024116
RefSeq Peptide - NP_077021
swissprot - A0A1D5RMT6
swissprot - A0A024R3A9
swissprot - H0Y3L3
swissprot - H0YCH2
swissprot - H0YG36
swissprot - H0YH71
swissprot - E9PM59
swissprot - Q9H5J8
swissprot - E9PKU8
Ensembl - ENSG00000166012
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TAF1DENSGALG00000017220Gallus gallus
 Taf1dENSMUSG00000031939Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR027976  TATA box-binding protein-associated factor 1D


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006361 transcription initiation from RNA polymerase I promoter TAS
 biological_processGO:0006362 transcription elongation from RNA polymerase I promoter TAS
 biological_processGO:0006363 termination of RNA polymerase I transcription TAS
 biological_processGO:0045815 positive regulation of gene expression, epigenetic TAS
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0005668 RNA polymerase transcription factor SL1 complex IEA
 cellular_componentGO:0005815 microtubule organizing center IDA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
SIRT1 negatively regulates rRNA expression
NoRC negatively regulates rRNA expression
B-WICH complex positively regulates rRNA expression
RNA Polymerase I Transcription Initiation
RNA Polymerase I Promoter Escape
RNA Polymerase I Chain Elongation
RNA Polymerase I Transcription Termination


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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