ENSG00000166337


Homo sapiens

Features
Gene ID: ENSG00000166337
  
Biological name :TAF10
  
Synonyms : Q12962 / TAF10 / TATA-box binding protein associated factor 10
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 11
Strand: -1
Band: p15.4
Gene start: 6606296
Gene end: 6612667
  
Corresponding Affymetrix probe sets: 200055_at (Human Genome U133 Plus 2.0 Array)   235135_at (Human Genome U133 Plus 2.0 Array)   235906_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000299424
Ensembl peptide - ENSP00000480402
NCBI entrez gene - 6881     See in Manteia.
OMIM - 600475
RefSeq - NM_006284
RefSeq Peptide - NP_006275
swissprot - A0A087WWP5
swissprot - Q12962
Ensembl - ENSG00000166337
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 taf10ENSDARG00000068641Danio rerio
 TAF10ENSGALG00000046371Gallus gallus
 Taf10ENSMUSG00000043866Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR003923  Transcription initiation factor TFIID, 23-30kDa subunit


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000082 G1/S transition of mitotic cell cycle IEA
 biological_processGO:0001889 liver development IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006352 DNA-templated transcription, initiation IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006366 transcription by RNA polymerase II TAS
 biological_processGO:0006367 transcription initiation from RNA polymerase II promoter TAS
 biological_processGO:0006368 transcription elongation from RNA polymerase II promoter TAS
 biological_processGO:0006915 apoptotic process IEA
 biological_processGO:0010468 regulation of gene expression IEA
 biological_processGO:0016578 histone deubiquitination IDA
 biological_processGO:0016579 protein deubiquitination TAS
 biological_processGO:0035264 multicellular organism growth IEA
 biological_processGO:0043966 histone H3 acetylation IDA
 biological_processGO:0051101 regulation of DNA binding IEA
 biological_processGO:0051260 protein homooligomerization IDA
 biological_processGO:0070365 hepatocyte differentiation IEA
 biological_processGO:1901796 regulation of signal transduction by p53 class mediator TAS
 cellular_componentGO:0000125 PCAF complex IDA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0005669 transcription factor TFIID complex IDA
 cellular_componentGO:0005737 cytoplasm IDA
 cellular_componentGO:0030914 STAGA complex IDA
 cellular_componentGO:0033276 transcription factor TFTC complex IDA
 cellular_componentGO:0048471 perinuclear region of cytoplasm IDA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IDA
 molecular_functionGO:0003713 transcription coactivator activity IDA
 molecular_functionGO:0004402 histone acetyltransferase activity IDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0019899 enzyme binding IPI
 molecular_functionGO:0030331 estrogen receptor binding IDA
 molecular_functionGO:0036459 thiol-dependent ubiquitinyl hydrolase activity TAS
 molecular_functionGO:0070063 RNA polymerase binding IDA


Pathways (from Reactome)
Pathway description
HIV Transcription Initiation
RNA Polymerase II HIV Promoter Escape
Transcription of the HIV genome
HATs acetylate histones
Ub-specific processing proteases
RNA Polymerase II Pre-transcription Events
Regulation of TP53 Activity through Phosphorylation
RNA Polymerase II Promoter Escape
RNA Polymerase II Transcription Pre-Initiation And Promoter Opening
RNA Polymerase II Transcription Initiation
RNA Polymerase II Transcription Initiation And Promoter Clearance


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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