ENSG00000167384


Homo sapiens

Features
Gene ID: ENSG00000167384
  
Biological name :ZNF180
  
Synonyms : Q9UJW8 / zinc finger protein 180 / ZNF180
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 19
Strand: -1
Band: q13.31
Gene start: 44474428
Gene end: 44500524
  
Corresponding Affymetrix probe sets: 219495_s_at (Human Genome U133 Plus 2.0 Array)   230065_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000468021
Ensembl peptide - ENSP00000467916
Ensembl peptide - ENSP00000468523
Ensembl peptide - ENSP00000221327
Ensembl peptide - ENSP00000375818
Ensembl peptide - ENSP00000465426
Ensembl peptide - ENSP00000466516
Ensembl peptide - ENSP00000466726
NCBI entrez gene - 7733     See in Manteia.
OMIM - 606740
RefSeq - XM_017027256
RefSeq - NM_001278508
RefSeq - NM_001278509
RefSeq - NM_001288759
RefSeq - NM_001288760
RefSeq - NM_001288761
RefSeq - NM_001288762
RefSeq - NM_001291633
RefSeq - NM_013256
RefSeq - XM_011527280
RefSeq - XM_017027250
RefSeq - XM_017027251
RefSeq - XM_017027252
RefSeq - XM_017027253
RefSeq - XM_017027254
RefSeq - XM_017027255
RefSeq Peptide - NP_001265438
RefSeq Peptide - NP_001275688
RefSeq Peptide - NP_001275689
RefSeq Peptide - NP_001275690
RefSeq Peptide - NP_001275691
RefSeq Peptide - NP_001278562
RefSeq Peptide - NP_037388
RefSeq Peptide - NP_001265437
swissprot - K7EMI5
swissprot - K7EN00
swissprot - K7EQP0
swissprot - K7ES30
swissprot - Q9UJW8
swissprot - A0A0A0MP75
swissprot - G5E9B8
Ensembl - ENSG00000167384
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 BX005085.5ENSDARG00000114108Danio rerio
 BX927193.2ENSDARG00000111026Danio rerio
 CR759833.1ENSDARG00000094484Danio rerio
 CZQB01141835.1ENSDARG00000112811Danio rerio
 si:dkey-199m13.7ENSDARG00000111824Danio rerio
 si:dkey-7i4.15ENSDARG00000097551Danio rerio
 znf1017ENSDARG00000114396Danio rerio
 znf1036ENSDARG00000094443Danio rerio
 znf1118ENSDARG00000115524Danio rerio
 znf1134ENSDARG00000097842Danio rerio
 znf979ENSDARG00000109211Danio rerio
 znf980ENSDARG00000116587Danio rerio
 znf985ENSDARG00000091025Danio rerio
 Zfp180ENSMUSG00000057101Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q6NX49 / ZNF544 / zinc finger protein 544ENSG0000019813143
Q8WXB4 / ZNF606 / zinc finger protein 606ENSG0000016670440
ZNF10 / P21506 / zinc finger protein 10ENSG0000025622335
ZFP37 / Q9Y6Q3 / ZFP37 zinc finger proteinENSG0000013686635
Q7Z7L9 / ZSCAN2 / zinc finger and SCAN domain containing 2ENSG0000017637134
Q9C0F3 / ZNF436 / zinc finger protein 436ENSG0000012594532
Q9UEG4 / ZNF629 / zinc finger protein 629ENSG0000010287032
Q7Z3I7 / ZNF572 / zinc finger protein 572ENSG0000018093829
Q86UD4 / ZNF329 / zinc finger protein 329ENSG0000018189429
Q6NX45 / ZNF774 / zinc finger protein 774ENSG0000019639128
Q6U7Q0 / ZNF322 / zinc finger protein 322ENSG0000018131522


Protein motifs (from Interpro)
Interpro ID Name
 IPR001909  Krueppel-associated box
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013087  Zinc finger C2H2-type
 IPR036051  KRAB domain superfamily
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding NAS
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Generic Transcription Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr