ENSG00000176371


Homo sapiens

Features
Gene ID: ENSG00000176371
  
Biological name :ZSCAN2
  
Synonyms : Q7Z7L9 / zinc finger and SCAN domain containing 2 / ZSCAN2
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 15
Strand: 1
Band: q25.2
Gene start: 84600986
Gene end: 84627796
  
Corresponding Affymetrix probe sets: 220516_at (Human Genome U133 Plus 2.0 Array)   231188_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000442693
Ensembl peptide - ENSP00000445451
Ensembl peptide - ENSP00000446041
Ensembl peptide - ENSP00000325123
Ensembl peptide - ENSP00000333895
Ensembl peptide - ENSP00000351257
Ensembl peptide - ENSP00000368663
Ensembl peptide - ENSP00000410198
Ensembl peptide - ENSP00000438628
Ensembl peptide - ENSP00000439132
Ensembl peptide - ENSP00000439584
Ensembl peptide - ENSP00000440004
Ensembl peptide - ENSP00000441342
Ensembl peptide - ENSP00000441855
NCBI entrez gene - 54993     See in Manteia.
RefSeq - XM_017022393
RefSeq - NM_001007072
RefSeq - NM_017894
RefSeq - NM_181877
RefSeq - XM_017022392
RefSeq Peptide - NP_001007073
RefSeq Peptide - NP_060364
RefSeq Peptide - NP_870992
swissprot - F5H789
swissprot - F8W6Y9
swissprot - Q7Z7L9
swissprot - A0A024RC69
swissprot - A0A0C4DFQ3
swissprot - F5GY18
swissprot - F5GZ04
swissprot - F5H2D8
swissprot - F5H1K4
swissprot - F5H3F3
swissprot - F5H4P1
Ensembl - ENSG00000176371
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 BX005085.5ENSDARG00000114108Danio rerio
 BX927193.2ENSDARG00000111026Danio rerio
 CR759833.1ENSDARG00000094484Danio rerio
 CZQB01141835.1ENSDARG00000112811Danio rerio
 si:dkey-199m13.7ENSDARG00000111824Danio rerio
 si:dkey-7i4.15ENSDARG00000097551Danio rerio
 znf1017ENSDARG00000114396Danio rerio
 znf1036ENSDARG00000094443Danio rerio
 znf1118ENSDARG00000115524Danio rerio
 znf1134ENSDARG00000097842Danio rerio
 znf979ENSDARG00000109211Danio rerio
 znf980ENSDARG00000116587Danio rerio
 znf985ENSDARG00000091025Danio rerio
 Q07230ENSMUSG00000038797Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q9UEG4 / ZNF629 / zinc finger protein 629ENSG0000010287043
Q6NX49 / ZNF544 / zinc finger protein 544ENSG0000019813143
Q8WXB4 / ZNF606 / zinc finger protein 606ENSG0000016670441
Q9UJW8 / ZNF180 / zinc finger protein 180ENSG0000016738438
Q9C0F3 / ZNF436 / zinc finger protein 436ENSG0000012594538
Q7Z3I7 / ZNF572 / zinc finger protein 572ENSG0000018093837
ZFP37 / Q9Y6Q3 / ZFP37 zinc finger proteinENSG0000013686636
ZNF10 / P21506 / zinc finger protein 10ENSG0000025622335
Q6NX45 / ZNF774 / zinc finger protein 774ENSG0000019639133
Q86UD4 / ZNF329 / zinc finger protein 329ENSG0000018189429
Q6U7Q0 / ZNF322 / zinc finger protein 322ENSG0000018131528


Protein motifs (from Interpro)
Interpro ID Name
 IPR003309  SCAN domain
 IPR008916  Retrovirus capsid, C-terminal
 IPR013087  Zinc finger C2H2-type
 IPR017114  C2H2-type Zinc finger protein, YY-1-like
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0007283 spermatogenesis IEA
 biological_processGO:0030154 cell differentiation IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding NAS
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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