ENSG00000168000


Homo sapiens

Features
Gene ID: ENSG00000168000
  
Biological name :BSCL2
  
Synonyms : BSCL2 / BSCL2, seipin lipid droplet biogenesis associated / Q96G97
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 11
Strand: -1
Band: q12.3
Gene start: 62690275
Gene end: 62709845
  
Corresponding Affymetrix probe sets: 208906_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000436026
Ensembl peptide - ENSP00000436991
Ensembl peptide - ENSP00000437044
Ensembl peptide - ENSP00000405265
Ensembl peptide - ENSP00000413209
Ensembl peptide - ENSP00000413340
Ensembl peptide - ENSP00000431782
Ensembl peptide - ENSP00000433888
Ensembl peptide - ENSP00000434149
Ensembl peptide - ENSP00000435500
Ensembl peptide - ENSP00000435831
Ensembl peptide - ENSP00000278893
Ensembl peptide - ENSP00000301781
Ensembl peptide - ENSP00000354032
Ensembl peptide - ENSP00000384080
Ensembl peptide - ENSP00000384258
Ensembl peptide - ENSP00000385332
Ensembl peptide - ENSP00000385561
Ensembl peptide - ENSP00000393728
NCBI entrez gene - 26580     See in Manteia.
OMIM - 606158
RefSeq - NM_032667
RefSeq - NM_001122955
RefSeq - NM_001130702
RefSeq Peptide - NP_116056
RefSeq Peptide - NP_001124174
RefSeq Peptide - NP_001116427
swissprot - Q96G97
swissprot - A0A024R540
swissprot - A0A024R549
swissprot - E9PIU3
swissprot - E9PJK0
swissprot - E9PJS9
swissprot - E9PPN5
swissprot - E9PR78
swissprot - E9PRU2
swissprot - E9PSB5
swissprot - F8W7Q8
swissprot - F8WER0
swissprot - H0YF20
swissprot - H7BXM1
swissprot - H7BYY0
swissprot - H7C2D5
swissprot - J3KQ12
Ensembl - ENSG00000168000
  
Related genetic diseases (OMIM): 269700 - Lipodystrophy, congenital generalized, type 2, 269700
  270685 - Silver spastic paraplegia syndrome, 270685
  600794 - Neuropathy, distal hereditary motor, type VA, 600794
  615924 - Encephalopathy, progressive, with or without lipodystrophy, 615924
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 bscl2ENSDARG00000037008Danio rerio
 Bscl2ENSMUSG00000071657Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR009617  Seipin family


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006629 lipid metabolic process IEA
 biological_processGO:0016042 lipid catabolic process IEA
 biological_processGO:0019915 lipid storage IEA
 biological_processGO:0034389 lipid particle organization IMP
 biological_processGO:0045444 fat cell differentiation ISS
 biological_processGO:0050995 negative regulation of lipid catabolic process ISS
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030176 integral component of endoplasmic reticulum membrane IDA
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000065 Labial hypertrophy 
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 HP:0000083 Renal failure 
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 HP:0000098 Increased body height 
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 HP:0000112 Nephropathy "A nonspecific term referring to disease or damage of the kidneys." [HPO:curators]
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 HP:0000141 Amenorrhea 
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 HP:0000144 Decreased fertility 
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 HP:0000147 polycystic ovaries 
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 HP:0000163 Abnormality of the oral cavity "Abnormality of the opening or hollow part of the mouth." [HPO:curators]
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 HP:0000280 Coarse facial features 
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 HP:0000303 Mandibular prognathia "Abnormal prominence of the chin related to an abnormally long mandible." [HPO:curators]
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 HP:0000325 Triangular facies 
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 HP:0000336 Prominent supraorbital ridges "Abnormal prominence of the supraorbital ridges, which are bony ridge located above the eye sockets in the area of the eyebrows." [HPO:curators]
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 HP:0000400 Large ears 
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 HP:0000750 Impaired language development 
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 HP:0000752 Hyperactivity 
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 HP:0000787 Kidney stones 
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 HP:0000819 Diabetes mellitus 
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 HP:0000822 Hypertension "High blood pressure." [HPO:curators]
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 HP:0000826 Precocious puberty "The onset of secondary sexual characteristics before a normal age. Although it is difficult to define normal age ranges because of the marked variation with which puberty begins in normal children, precocious puberty can be defined as the onset of puberty before the age of 8 years in girls or 9 years in boys." [HPO:curators]
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 HP:0000842 Hyperinsulinemia 
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 HP:0000845 Acromegaly "Acromegaly is a condition resulting from overproduction of growth hormone by the pituitary gland in persons with closed epiphyses, and consists chiefly in the enlargement of the distal parts of the body. The circumference of the skull increases, the nose becomes broad, the tongue becomes enlarged, the facial features become coarsened, the mandible grows excessively, and the teeth become separated. The fingers and toes grow chiefly in thickness." [HPO:curators]
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 HP:0000855 Insulin resistance 
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 HP:0000868 Decreased fertility in females 
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 HP:0000876 Oligomenorrhea 
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 HP:0000877 Insulin-resistant diabetes mellitus at puberty 
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 HP:0000956 Acanthosis nigricans 
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 HP:0000975 Hyperhidrosis "An abnormally increased perspiration." [HPO:probinson]
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 HP:0001000 Abnormality of skin pigmentation 
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 HP:0001007 Hirsutism "Abnormally increased hair growth." [HPO:curators]
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 HP:0001171 Ectrodactyly (hands) 
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 HP:0001176 Large hands 
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 HP:0001249 Mental retardation 
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001251 Ataxia "Ataxia is a nonspecific neurological sign and symptom consisting of gross lack of coordination of muscle movements. Ataxia is caused by dysfunction of one or more parts of the nervous system including the cerebellum, the sensory nervous system, the vestibular system, or the cerebral cortex." [HPO:curators]
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 HP:0001256 Mental retardation, mild "Mild mental retardation is defined as an intelligence quotient (IQ) in the range of 50-69." [HPO:curators]
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 HP:0001257 Spasticity "A motor disorder characterized by a velocity-dependent increase in tonic stretch reflexes with increased muscle tone, exaggerated (hyperexcitable) tendon reflexes." [HPO:curators]
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 HP:0001258 Spastic paraplegia 
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 HP:0001268 Mental deterioration 
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 HP:0001298 Encephalopathy 
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 HP:0001332 Dystonia "An abnormally increased muscular tone that causes fixed abnormal postures. There is a slow, intermittent twisting motion that leads to exaggerated turning and posture of the extremities and trunk." [HPO:curators]
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 HP:0001336 Myoclonus "Very brief, involuntary random muscular contractions occurring at rest, in response to sensory stimuli, or accompanying voluntary movements." [HPO:curators]
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 HP:0001337 Tremor "An unintentional, oscillating to-and-fro muscle movement." [HPO:curators]
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 HP:0001347 Hyperreflexia "The presence of overactive or overresponsive reflexes." [HPO:curators]
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 HP:0001348 Brisk reflexes 
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 HP:0001394 Cirrhosis 
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 HP:0001397 Hepatic steatosis 
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 HP:0001399 Hepatic failure 
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 HP:0001425 Heterogeneous 
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 HP:0001537 Umbilical hernia "Protrusion of abdominal contents through a defect in the abdominal wall musculature around the umbilicus. Skin and subcutaneous tissue overlie the defect." [HPO:curators]
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 HP:0001544 Prominent umbilicus "Abnormally prominent umbilicus (belly button)." [HPO:curators]
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 HP:0001620 High pitched voice 
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 HP:0001639 Hypertrophic cardiomyopathy 
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 HP:0001658 Myocardial infarction 
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 HP:0001733 Pancreatitis 
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 HP:0001735 Pancreatitis, acute 
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 HP:0001744 Splenomegaly "An abnormal enlargement of the spleen." [HPO:curators]
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 HP:0001761 Pes cavus 
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 HP:0001763 Pes planus "A condition in which the arch of the foot is flat, with the entire sole of the foot being in near-complete contact with the ground." [HPO:curators]
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 HP:0001765 Hammer toes 
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 HP:0001769 Broad feet "Increased width of the feet." [HPO:curators]
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 HP:0001833 Large feet 
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 HP:0002059 Cerebral atrophy 
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 HP:0002061 Lower limb spasticity 
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 HP:0002064 Spastic gait 
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 HP:0002066 Gait ataxia "Impairment of the ability to coordinate the movements required for normal walking." [HPO:curators]
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 HP:0002092 Pulmonary hypertension 
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 HP:0002119 Ventriculomegaly 
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 HP:0002133 Status epilepticus 
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 HP:0002155 Hypertriglyceridemia 
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 HP:0002166 Decreased vibratory sense in the lower limbs "A decrease in the ability to perceive vibration in the legs." [HPO:curators]
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 HP:0002174 Postural tremor "A type of tremors that is triggered by holding a limb in a fixed position." [HPO:curators]
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 HP:0002230 Generalized hirsutism "Abnormally increased hair growth over much of the entire body." [HPO:curators]
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 HP:0002240 Hepatomegaly "An abnormal enlargment of the liver." [HPO:curators]
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 HP:0002273 Tetraparesis 
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 HP:0002275 Poor motor coordination 
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 HP:0002340 Caudate atrophy 
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 HP:0002360 Sleep disturbances "An abnormality of sleep including such phenomena as 1) insomnia/hypersomnia, 2) non-restorative sleep, 3) sleep schedule disorder, 4) excessive daytime somnolence, 5) sleep apnea, and 6) restlessness." [HPO:curators]
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 HP:0002371 Loss of speech 
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 HP:0002376 Developmental regression 
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 HP:0002448 Encephalopathy, progressive 
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 HP:0002451 Limb dystonia 
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 HP:0002460 Distal muscle weakness "Reduced strength of the distal musculature." [HPO:curators]
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 HP:0002529 Neuropathology shows neuronal loss in basal ganglia, brainstem, and cerebellum 
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 HP:0002591 Polyphagia 
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 HP:0002721 Immunodeficiency 
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 HP:0002757 Recurrent fractures "The repeated occurence of bone fractures (implying an abnormally increased tendency for fracture)." [HPO:curators]
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 HP:0002833 Lytic cystic lesions in appendicular bones (occurs after puberty) 
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 HP:0002878 Early respiratory failure 
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 HP:0002910 Elevated transaminases "Elevations of the levels of SGOT and SGPT in the serum. SGOT (serum glutamic oxaloacetic transaminase) and SGPT (serum glutamic pyruvic transaminase) are transaminases primarily found in the liver and heart and are released into the bloodstream as the result of liver or heart damage. SGOT and SGPT are used clinically mainly as markers of liver damage." [HPO:curators]
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 HP:0002936 Distal sensory impairment 
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 HP:0003198 Myopathy 
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 HP:0003292 Decreased serum leptin 
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 HP:0003392 First dorsal interossei muscle weakness 
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 HP:0003393 Thenar muscle atrophy 
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 HP:0003426 First dorsal interossei muscle atrophy 
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 HP:0003427 Thenar muscle weakness 
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 HP:0003435 Cold-induced hand cramps 
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 HP:0003484 Upper limb involvement may occur later 
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 HP:0003487 Babinski sign "Upturning of the big toe (and sometimes fanning of the other toes) in response to stimulation of the sole of the foot. If the Babinski sign is present it can indicate damage to the corticospinal tract." [HPO:curators]
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 HP:0003577 Onset at birth 
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 HP:0003674 Age of onset 
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 HP:0003676 Progressive disorder 
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 HP:0003677 Slow progression 
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 HP:0003693 Distal amyotrophy "Muscular atrophy affecting muscles in the distal portions of the extremities." [HPO:curators]
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 HP:0003712 Muscle hypertrophy "Hypertrophy (increase in size) of muscle cells (as opposed to hyperplasia, which refers to an increase in the number of muscle cells)." [HPO:curators]
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 HP:0003716 Generalized muscular appearance from birth 
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 HP:0003758 Reduced subcutaneous adipose tissue "The presence of an abnormally reduced amount of subcutaneous adipose tissue." [HPO:curators]
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 HP:0003809 Nearly complete absence of metabolically active adipose tissue (subcutaneous, intraabdominal, intrathoracic) 
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 HP:0005616 Accelerated skeletal maturation "An abnormally increased rate of skeletal maturation. Accelerated skeletal maturation can be diagnosed on the basis of an estimation of the bone age from radiographs of specific bones in the human body." [HPO:curators]
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 HP:0007256 Mild pyramidal signs 
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 HP:0007272 Progressive psychomotor deterioration 
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 HP:0007340 Lower limb muscle weakness "Weakness of the muscles of the legs." [HPO:curators]
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 HP:0008665 Hypertrophic clitoris 
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 HP:0009027 Foot dorsiflexor weakness 
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 HP:0009064 Generalized lipodystrophy "Generalized degenerative changes of the fat tissue." [HPO:curators]
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 HP:0009125 Lipodystrophy "Degenerative changes of the fat tissue." [HPO:curators]
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 HP:0009130 Amyotrophy involving the musculature of the hand "Muscular atrophy involving the muscles of the hand." [HPO:curators]
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 HP:0009830 Peripheral neuropathy "Peripheral neuropathy is a general term for any disorder of the peripheral nervous system. The main clinical features used to classify peripheral neuropathy are distribution, type (mainly demyelinating versus mainly axonal), duration, and course." [HPO:curators]
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 HP:0012062 Bone cyst "A fluid filled cavity that develops with a bone." [HPO:probinson]
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 HP:0025128 Reduced intraabdominal adipose tissue "An abnormally reduced amount of adipose tissue in the abdominal cavity." []
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 HP:0030237 Hand muscle weakness "Reduced strength of the musculature of the hand." [HPO:probinson]
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 HP:0030838 Hip pain "An unpleasant sensation characterized by physical discomfort (such as pricking, throbbing, or aching) localized to the hip." [UToronto:chum]
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 HP:0030839 Knee pain "An unpleasant sensation characterized by physical discomfort (such as pricking, throbbing, or aching) localized to the knee." [UToronto:chum]
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 HP:0031374 Ankle weakness "Reduced strength of the muscles that lift or otherwise move the foot at the ankle." []
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 HP:0040131 Abnormal motor nerve conduction velocity 
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 HP:0100545 Arterial stenosis 
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 HP:0100578 Lipoatrophy "Localized loss of fat tissue." [HPO:sdoelken]
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 HP:0100820 Glomerulopathy "Inflammatory or noninflammatory diseases affecting the glomeruli of the nephron." [HPO:sdoelken]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
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