ENSG00000168575


Homo sapiens

Features
Gene ID: ENSG00000168575
  
Biological name :SLC20A2
  
Synonyms : Q08357 / SLC20A2 / solute carrier family 20 member 2
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 8
Strand: -1
Band: p11.21
Gene start: 42416475
Gene end: 42541926
  
Corresponding Affymetrix probe sets: 202744_at (Human Genome U133 Plus 2.0 Array)   231818_x_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000429299
Ensembl peptide - ENSP00000427756
Ensembl peptide - ENSP00000429712
Ensembl peptide - ENSP00000430462
Ensembl peptide - ENSP00000430166
Ensembl peptide - ENSP00000429989
Ensembl peptide - ENSP00000429754
Ensembl peptide - ENSP00000340465
NCBI entrez gene - 6575     See in Manteia.
OMIM - 158378
RefSeq - XM_017013752
RefSeq - NM_006749
RefSeq - XM_005273613
RefSeq - XM_005273615
RefSeq - XM_006716390
RefSeq - XM_006716391
RefSeq - XM_017013748
RefSeq - XM_017013749
RefSeq - XM_017013750
RefSeq - XM_017013751
RefSeq - NM_001257180
RefSeq - NM_001257181
RefSeq Peptide - NP_001244110
RefSeq Peptide - NP_006740
RefSeq Peptide - NP_001244109
swissprot - E5RGJ6
swissprot - E5RJW9
swissprot - Q08357
swissprot - E5RGG8
swissprot - E5RIX1
swissprot - E5RGM8
Ensembl - ENSG00000168575
  
Related genetic diseases (OMIM): 213600 - Basal ganglia calcification, idiopathic, 1, 213600
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 slc20a2ENSDARG00000060796Danio rerio
 SLC20A2ENSGALG00000038336Gallus gallus
 Q80UP8ENSMUSG00000037656Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q8WUM9 / SLC20A1 / solute carrier family 20 member 1ENSG0000014413662


Protein motifs (from Interpro)
Interpro ID Name
 IPR001204  Phosphate transporter


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport TAS
 biological_processGO:0006814 sodium ion transport IEA
 biological_processGO:0006817 phosphate ion transport IEA
 biological_processGO:0016032 viral process IEA
 biological_processGO:0035725 sodium ion transmembrane transport IEA
 biological_processGO:0044341 sodium-dependent phosphate transport IEA
 biological_processGO:0046718 viral entry into host cell IEA
 biological_processGO:0055085 transmembrane transport IEA
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0005887 integral component of plasma membrane TAS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0001618 virus receptor activity IEA
 molecular_functionGO:0005315 inorganic phosphate transmembrane transporter activity IEA
 molecular_functionGO:0005436 sodium:phosphate symporter activity TAS
 molecular_functionGO:0015293 symporter activity IEA
 molecular_functionGO:0015319 sodium:inorganic phosphate symporter activity IBA
 molecular_functionGO:0015321 sodium-dependent phosphate transmembrane transporter activity TAS


Pathways (from Reactome)
Pathway description
Sodium-coupled phosphate cotransporters
Defective SLC20A2 causes idiopathic basal ganglia calcification 1 (IBGC1)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000020 Urinary incontinence "Loss of the ability to control the urinary bladder leading to involuntary urination." [HPO:sdoelken]
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 HP:0000252 Microcephaly "Microcephaly is a neurodevelopmental disorder in which the circumference of the head is more than two standard deviations smaller than the age- and gender-dependent norm." [HPO:curators]
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 HP:0000298 Mask-like facies 
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 HP:0000709 Psychosis "A condition characterized by changes of personality and thought patterns often accompanied by hallucinations and delusional beliefs." [HPO:curators]
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 HP:0000716 Depression "A condition characterized by pervasive dysphoric mood, loss of interests, and inability to experience pleasure." [HPO:curators]
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001260 Dysarthria "Dysarthric speech is a general description referring to a neurological speech disorder characterized by poor articulation. Depending on the involved neurological structures, dysarthria may be further classified as spastic, flaccid, ataxic, hyperkinetic and hypokinetic, or mixed." [HPO:curators]
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 HP:0001268 Mental deterioration 
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 HP:0001288 Gait disturbance "The term gait disturbance can refer to any disruption of the ability to walk. In general, this can refer to neurological diseases but also fractures or other sources of pain that is triggered upon walking. However, in the current context gait disturbance refers to difficulty walking on the basis of a neurological or muscular disease." [HPO:curators]
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 HP:0001300 Parkinsonism 
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 HP:0001332 Dystonia "An abnormally increased muscular tone that causes fixed abnormal postures. There is a slow, intermittent twisting motion that leads to exaggerated turning and posture of the extremities and trunk." [HPO:curators]
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 HP:0001337 Tremor "An unintentional, oscillating to-and-fro muscle movement." [HPO:curators]
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 HP:0001347 Hyperreflexia "The presence of overactive or overresponsive reflexes." [HPO:curators]
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 HP:0001511 Intrauterine growth retardation 
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 HP:0001873 Thrombocytopenia 
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 HP:0001933 Subcutaneous hemorrhage 
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 HP:0002063 Rigidity 
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 HP:0002067 Bradykinesia "Bradykinesia literally means slow movement, and is used clinically to denote a slowness in the execution of movement (in contrast to hypokinesia, which is used to refer to slowness in the initiation of movement)." [HPO:curators]
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 HP:0002072 Chorea "Chorea (Greek for dance ) refers to widespread arrhythmic involuntary movements of a forcible, jerky and restless fashion." [HPO:curators]
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 HP:0002075 Dysdiadochokinesis "An inability to perform rapidly alternating movements, such as rhythmically tapping the fingers on the knee, generally related to a cerebellar lesion." [HPO:curators]
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 HP:0002119 Ventriculomegaly 
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 HP:0002135 Basal ganglia calcification "Calcification affecting one or more structures of the basal ganglia." [HPO:curators]
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 HP:0002172 Postural instability 
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 HP:0002240 Hepatomegaly "An abnormal enlargment of the liver." [HPO:curators]
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 HP:0002269 Neuronal migration disorder 
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 HP:0002305 Athetosis "Athetosis (from the Greek word for changeable or unfixed ) refers to an inability to sustain the muscles of the fingers, toes, tongue, or any other group of muscles in a fixed position. Instead, posture is interrupted by slow, purposeless involuntary movements." [HPO:curators]
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 HP:0002354 Memory impairment 
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 HP:0002406 Limb dysmetria 
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 HP:0002461 Dense calcifications in the cerebellar dentate nucleus 
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 HP:0002504 Neuropathologic examination shows calcification of the small brain vessels 
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 HP:0002514 Cerebral calcification "The presence of calcification within brain structures." [HPO:curators]
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 HP:0003581 Onset in adulthood 
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 HP:0003676 Progressive disorder 
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 HP:0007256 Mild pyramidal signs 
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 HP:0007957 Variable degree of corneal opacities 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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