ENSG00000170113


Homo sapiens

Features
Gene ID: ENSG00000170113
  
Biological name :NIPA1
  
Synonyms : NIPA1 / non imprinted in Prader-Willi/Angelman syndrome 1 / Q7RTP0
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 15
Strand: 1
Band: q11.2
Gene start: 22773063
Gene end: 22829791
  
Corresponding Affymetrix probe sets: 1552696_at (Human Genome U133 Plus 2.0 Array)   225752_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000453286
Ensembl peptide - ENSP00000453797
Ensembl peptide - ENSP00000453722
Ensembl peptide - ENSP00000337452
Ensembl peptide - ENSP00000393962
NCBI entrez gene - 123606     See in Manteia.
OMIM - 608145
RefSeq - NM_144599
RefSeq - NM_001142275
RefSeq Peptide - NP_001135747
RefSeq Peptide - NP_653200
swissprot - Q7RTP0
swissprot - H0YLP7
swissprot - H0YMY7
swissprot - A0A024R344
Ensembl - ENSG00000170113
  
Related genetic diseases (OMIM): 600363 - Spastic paraplegia 6, autosomal dominant, 600363
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 nipa1ENSDARG00000055917Danio rerio
 NIPA1ENSGALG00000039811Gallus gallus
 Nipa1ENSMUSG00000047037Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
NIPAL1 / Q6NVV3 / NIPA like domain containing 1ENSG0000016329343
NIPA2 / Q8N8Q9 / non imprinted in Prader-Willi/Angelman syndrome 2ENSG0000014015741
NIPAL4 / Q0D2K0 / NIPA like domain containing 4ENSG0000017254839
NIPAL3 / Q6P499 / NIPA like domain containing 3ENSG0000000146122
NIPAL2 / Q9H841 / NIPA like domain containing 2ENSG0000010436120


Protein motifs (from Interpro)
Interpro ID Name
 IPR008521  Magnesium transporter NIPA


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0015693 magnesium ion transport IEA
 biological_processGO:0055085 transmembrane transport TAS
 biological_processGO:1903830 magnesium ion transmembrane transport IEA
 cellular_componentGO:0005768 endosome IEA
 cellular_componentGO:0005769 early endosome IEA
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0015095 magnesium ion transmembrane transporter activity IEA


Pathways (from Reactome)
Pathway description
Miscellaneous transport and binding events


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000012 Urinary urgency 
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 HP:0000020 Urinary incontinence "Loss of the ability to control the urinary bladder leading to involuntary urination." [HPO:sdoelken]
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001258 Spastic paraplegia 
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 HP:0001288 Gait disturbance "The term gait disturbance can refer to any disruption of the ability to walk. In general, this can refer to neurological diseases but also fractures or other sources of pain that is triggered upon walking. However, in the current context gait disturbance refers to difficulty walking on the basis of a neurological or muscular disease." [HPO:curators]
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 HP:0001337 Tremor "An unintentional, oscillating to-and-fro muscle movement." [HPO:curators]
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 HP:0001761 Pes cavus 
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 HP:0002061 Lower limb spasticity 
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 HP:0002064 Spastic gait 
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 HP:0002069 Generalized tonic-clonic seizures "Generalized tonic-clonic seizures are `generalized seizures` (HP:0002197) in which the patient suddenly loses conciousness, the eyes roll back, and the entire body musculature undergoes tonic contractions. In the clonic phase of the seizure, there are rhythmic contractions of the musculature alternating with relaxation of all muscle groups. Loss of sphincter control during the seizure is common. This form of seizure was formerly commonly called grand mal seizure." [HPO:curators]
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 HP:0002166 Decreased vibratory sense in the lower limbs "A decrease in the ability to perceive vibration in the legs." [HPO:curators]
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 HP:0002169 Clonus 
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 HP:0002174 Postural tremor "A type of tremors that is triggered by holding a limb in a fixed position." [HPO:curators]
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 HP:0002314 Degeneration of the lateral corticospinal tracts 
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 HP:0002395 Lower limb hyperreflexia 
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 HP:0002495 Impaired vibratory sense "A decrease in the ability to perceive vibration. Clinically, this is usually tested with a tuning fork which vibrates at 128 Hz and is applied to bony prominences such as the malleoli at the ankles or the metacarpal-phalangeal joints. There is a slow decay of vibration from the tuning fork. The degree of vibratory sense loss can be crudely estimated by counting the number of seconds that the examiner can perceive the vibration longer than the patient." [HPO:curators]
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 HP:0002839 Sphincter disturbances (bladder) 
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 HP:0003202 Amyotrophy "The presence of muscular atrophy (which is also known as amyotrophy)." [HPO:curators]
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 HP:0003487 Babinski sign "Upturning of the big toe (and sometimes fanning of the other toes) in response to stimulation of the sole of the foot. If the Babinski sign is present it can indicate damage to the corticospinal tract." [HPO:curators]
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 HP:0003587 Insidious onset 
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 HP:0003676 Progressive disorder 
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 HP:0003828 Variable expressivity 
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 HP:0007340 Lower limb muscle weakness "Weakness of the muscles of the legs." [HPO:curators]
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 HP:0008800 Limited hip movement 
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 HP:0010505 Limitation of movement at ankles "An abnormal limitation of the mobility of the ankle joint." [HPO:curators]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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