ENSG00000172548


Homo sapiens

Features
Gene ID: ENSG00000172548
  
Biological name :NIPAL4
  
Synonyms : NIPAL4 / NIPA like domain containing 4 / Q0D2K0
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 5
Strand: 1
Band: q33.3
Gene start: 157460019
Gene end: 157474717
  
Corresponding Affymetrix probe sets: 230188_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000311687
Ensembl peptide - ENSP00000406456
Ensembl peptide - ENSP00000430810
NCBI entrez gene - 348938     See in Manteia.
OMIM - 609383
RefSeq - XM_011534552
RefSeq - NM_001099287
RefSeq - NM_001172292
RefSeq Peptide - NP_001092757
RefSeq Peptide - NP_001165763
swissprot - Q0D2K0
swissprot - H0YC31
Ensembl - ENSG00000172548
  
Related genetic diseases (OMIM): 612281 - Ichthyosis, congenital, autosomal recessive 6, 612281
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 nipal4ENSDARG00000059365Danio rerio
 NIPAL4ENSGALG00000039687Gallus gallus
 Nipal4ENSMUSG00000020411Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
NIPAL1 / Q6NVV3 / NIPA like domain containing 1ENSG0000016329346
NIPA2 / Q8N8Q9 / non imprinted in Prader-Willi/Angelman syndrome 2ENSG0000014015745
NIPA1 / Q7RTP0 / non imprinted in Prader-Willi/Angelman syndrome 1ENSG0000017011327
NIPAL2 / Q9H841 / NIPA like domain containing 2ENSG0000010436120
NIPAL3 / Q6P499 / NIPA like domain containing 3ENSG0000000146118


Protein motifs (from Interpro)
Interpro ID Name
 IPR008521  Magnesium transporter NIPA


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0015693 magnesium ion transport IBA
 biological_processGO:1903830 magnesium ion transmembrane transport IEA
 cellular_componentGO:0016020 membrane IBA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0015095 magnesium ion transmembrane transporter activity IEA


Pathways (from Reactome)
Pathway description
Miscellaneous transport and binding events


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000083 Renal failure 
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 HP:0000164 Abnormality of the teeth "Any abnormality of the primary (deciduous) or permanent teeth." [HPO:curators]
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 HP:0000232 Everted lower lip 
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 HP:0000365 Hearing loss 
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 HP:0000389 Chronic otitis media 
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 HP:0000491 Keratitis "Inflammation of the cornea." [HPO:curators]
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 HP:0000656 Ectropion "An abnormal turning outward of the lower eyelid." [HPO:sdoelken]
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 HP:0000958 Dry skin 
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 HP:0000962 Hyperkeratosis "Hyperkeratosis is thickening of the outer layer of the skin, the stratum corneum, which is composed of large, polyhedral, plate-like envelopes filled with keratin which are the dead cells that have migrated up from the stratum granulosum." [HPO:curators]
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 HP:0000966 Hypohidrosis "Abnormally diminished capacity to sweat." [HPO:curators]
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 HP:0000982 Palmoplantar keratoderma 
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 HP:0000989 Pruritus "Pruritus is an itch or a sensation that makes a person want to scratch. This term refers to an abnormally increased disposition to experience pruritus." [HPO:curators]
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 HP:0001006 Hypotrichosis "Reduced or lacking hair growth." [HPO:curators]
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 HP:0001019 Erythroderma "An inflammatory exfoliative dermatosis involving nearly all of the surface of the skin. Erythroderma develops suddenly. A patchy erythema may generalize and spread to affect most of the skin. Scaling may appear in 2-6 days and be accompanied by hot, red, dry skin, malaise, and fever." [HPO:probinson]
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 HP:0001036 Parakeratosis 
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 HP:0001508 Failure to thrive 
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 HP:0001596 Alopecia "Loss of hair from the head or body." [HPO:curators]
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 HP:0001597 Abnormality of the nails "Abnormality of the fingernails or toenails." [HPO:curators]
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 HP:0001944 Dehydration 
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 HP:0002205 Recurrent respiratory infections 
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 HP:0004322 Decreased body height "A height below that which is expected according to age and gender norms. Although there is no universally accepted definition of short stature, many refer to "short stature" as height more than 2 standard deviations below the mean for age and gender (or below the 3rd percentile for age and gender dependent norms)." [HPO:curators]
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 HP:0007479 Congenital nonbullous ichthyosiform erythroderma 
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 HP:0008064 Ichthyosiform abnormality of the skin 
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 HP:0008070 Sparse hair 
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 HP:0011039 Abnormality of the helix "An abnormality of the `helix` (FMA:60992)." [HPO:probinson]
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 HP:0025092 Epidermal acanthosis "Diffuse hypertrophy or thickening of the stratum spinosum of the epidermis (prickle cell layer of the skin)." []
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 HP:0100543 Cognitive impairment "Abnormality in the process of thought including the ability to process information." [HPO:sdoelken]
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 HP:0100679 Lack of skin elasticity 
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 HP:0100758 Gangrene "A serious and potentially life-threatening condition that arises when a considerable mass of body tissue dies (necrosis)." [ISBN:9780781770873]
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 HP:0100806 Sepsis 
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 HP:0100840 Aplasia/Hypoplasia of the eyebrow "Absence or underdevelopment of the eyebrow." [HPO:probinson]
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 HP:0200020 Corneal erosions "Erosions or Abbrasions of the cornea s outermost layer of epithelial cells." [HPO:sdoelken]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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