ENSG00000170482


Homo sapiens

Features
Gene ID: ENSG00000170482
  
Biological name :SLC23A1
  
Synonyms : Q9UHI7 / SLC23A1 / solute carrier family 23 member 1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 5
Strand: -1
Band: q31.2
Gene start: 139367196
Gene end: 139384553
  
Corresponding Affymetrix probe sets: 223732_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000302701
Ensembl peptide - ENSP00000302851
Ensembl peptide - ENSP00000422688
Ensembl peptide - ENSP00000427271
NCBI entrez gene - 9963     See in Manteia.
OMIM - 603790
RefSeq - XM_011543769
RefSeq - XM_006714741
RefSeq - XM_011543765
RefSeq - XM_011543766
RefSeq - XM_011543767
RefSeq - XM_011543768
RefSeq - NM_005847
RefSeq - NM_152685
RefSeq - XM_005272148
RefSeq - XM_005272149
RefSeq Peptide - NP_005838
RefSeq Peptide - NP_689898
swissprot - H0YAJ1
swissprot - Q9UHI7
swissprot - H0Y902
Ensembl - ENSG00000170482
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 slc23a1ENSDARG00000015033Danio rerio
 SLC23A1ENSGALG00000037642Gallus gallus
 Q9Z2J0ENSMUSG00000024354Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q9UGH3 / SLC23A2 / solute carrier family 23 member 2ENSG0000008905764
Q6PIS1 / SLC23A3 / solute carrier family 23 member 3ENSG0000021390127


Protein motifs (from Interpro)
Interpro ID Name
 IPR006043  Xanthine/uracil/vitamin C permease
 IPR029954  Solute carrier family 23 member 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006139 nucleobase-containing compound metabolic process TAS
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0006814 sodium ion transport IEA
 biological_processGO:0007420 brain development ISS
 biological_processGO:0009636 response to toxic substance IDA
 biological_processGO:0015851 nucleobase transport TAS
 biological_processGO:0015882 L-ascorbic acid transmembrane transport IEA
 biological_processGO:0019852 L-ascorbic acid metabolic process TAS
 biological_processGO:0030324 lung development IEA
 biological_processGO:0035725 sodium ion transmembrane transport IEA
 biological_processGO:0055085 transmembrane transport IEA
 biological_processGO:0070837 dehydroascorbic acid transport IMP
 biological_processGO:0070904 transepithelial L-ascorbic acid transport IDA
 cellular_componentGO:0005737 cytoplasm ISS
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0005887 integral component of plasma membrane TAS
 cellular_componentGO:0009925 basal plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0016324 apical plasma membrane IDA
 cellular_componentGO:0043229 intracellular organelle IDA
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008520 L-ascorbate:sodium symporter activity IDA
 molecular_functionGO:0015081 sodium ion transmembrane transporter activity IDA
 molecular_functionGO:0015205 nucleobase transmembrane transporter activity TAS
 molecular_functionGO:0015229 L-ascorbic acid transmembrane transporter activity TAS
 molecular_functionGO:0015293 symporter activity IEA
 molecular_functionGO:0022857 transmembrane transporter activity IEA
 molecular_functionGO:0033300 dehydroascorbic acid transmembrane transporter activity IMP
 molecular_functionGO:0070890 sodium-dependent L-ascorbate transmembrane transporter activity IEA


Pathways (from Reactome)
Pathway description
Vitamin C (ascorbate) metabolism


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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