ENSG00000171298


Homo sapiens

Features
Gene ID: ENSG00000171298
  
Biological name :GAA
  
Synonyms : GAA / glucosidase alpha, acid / P10253
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 17
Strand: 1
Band: q25.3
Gene start: 80101556
Gene end: 80119879
  
Corresponding Affymetrix probe sets: 202812_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000374665
Ensembl peptide - ENSP00000459972
Ensembl peptide - ENSP00000460543
Ensembl peptide - ENSP00000305692
Ensembl peptide - ENSP00000458306
NCBI entrez gene - 2548     See in Manteia.
OMIM - 606800
RefSeq - XM_005257194
RefSeq - NM_000152
RefSeq - NM_001079803
RefSeq - NM_001079804
RefSeq - XM_005257193
RefSeq Peptide - NP_001073271
RefSeq Peptide - NP_001073272
RefSeq Peptide - NP_000143
swissprot - P10253
swissprot - I3L2V9
swissprot - I3L0S5
swissprot - I3L3L3
Ensembl - ENSG00000171298
  
Related genetic diseases (OMIM): 232300 - Glycogen storage disease II, 232300
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 gaaENSDARG00000090714Danio rerio
 GAA (1 of many)ENSDARG00000116493Danio rerio
 GAAENSGALG00000038853Gallus gallus
 GaaENSMUSG00000025579Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
MGAM / O43451 / maltase-glucoamylaseENSG0000025733541
MGAM2 / Q2M2H8 / maltase-glucoamylase 2 (putative)ENSG0000025774339
SI / P14410 / sucrase-isomaltaseENSG0000009040238
GANAB / Q14697 / glucosidase II alpha subunitENSG0000008959727
GANC / Q8TET4 / glucosidase alpha, neutral CENSG0000021401325
MYORG / Q6NSJ0 / myogenesis regulating glycosidase (putative)ENSG0000016497614


Protein motifs (from Interpro)
Interpro ID Name
 IPR000322  Glycoside hydrolase family 31
 IPR000519  P-type trefoil domain
 IPR011013  Galactose mutarotase-like domain superfamily
 IPR017853  Glycoside hydrolase superfamily
 IPR017957  P-type trefoil, conserved site
 IPR025887  Glycoside hydrolase family 31, N-terminal domain
 IPR030458  Glycosyl hydrolases family 31, active site
 IPR030459  Glycosyl hydrolases family 31, conserved site
 IPR031727  Galactose mutarotase, N-terminal barrel


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000023 maltose metabolic process IC
 biological_processGO:0002026 regulation of the force of heart contraction IEA
 biological_processGO:0002086 diaphragm contraction IMP
 biological_processGO:0003007 heart morphogenesis IEA
 biological_processGO:0005975 carbohydrate metabolic process IEA
 biological_processGO:0005977 glycogen metabolic process IEA
 biological_processGO:0005980 glycogen catabolic process IDA
 biological_processGO:0005985 sucrose metabolic process IC
 biological_processGO:0006006 glucose metabolic process IC
 biological_processGO:0006941 striated muscle contraction IEA
 biological_processGO:0007040 lysosome organization IEA
 biological_processGO:0007626 locomotory behavior IEA
 biological_processGO:0008152 metabolic process IEA
 biological_processGO:0009888 tissue development IEA
 biological_processGO:0043181 vacuolar sequestering IMP
 biological_processGO:0043312 neutrophil degranulation TAS
 biological_processGO:0046716 muscle cell cellular homeostasis IEA
 biological_processGO:0050884 neuromuscular process controlling posture IEA
 biological_processGO:0050885 neuromuscular process controlling balance IEA
 biological_processGO:0060048 cardiac muscle contraction IMP
 cellular_componentGO:0005764 lysosome IDA
 cellular_componentGO:0005765 lysosomal membrane IEA
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0035577 azurophil granule membrane TAS
 cellular_componentGO:0043202 lysosomal lumen TAS
 cellular_componentGO:0070062 extracellular exosome HDA
 cellular_componentGO:0070821 tertiary granule membrane TAS
 cellular_componentGO:0101003 ficolin-1-rich granule membrane TAS
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA
 molecular_functionGO:0004558 alpha-1,4-glucosidase activity EXP
 molecular_functionGO:0004574 oligo-1,6-glucosidase activity EXP
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0016798 hydrolase activity, acting on glycosyl bonds IEA
 molecular_functionGO:0030246 carbohydrate binding IEA
 molecular_functionGO:0032450 maltose alpha-glucosidase activity IEA
 molecular_functionGO:0090599 alpha-glucosidase activity IEA


Pathways (from Reactome)
Pathway description
Glycogen storage disease type II (GAA)
Neutrophil degranulation
Glycogen breakdown (glycogenolysis)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000158 Macroglossia "Increased length and width of the tongue." [pmid:19125428]
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 HP:0000365 Hearing loss 
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 HP:0001252 Muscular hypotonia "Muscular hypotonia is an abnormally low muscle tone (the amount of tension or resistance to movement in a muscle), often involving reduced muscle strength. Hypotonia is characterized by a diminished resistance to passive stretching." [HPO:curators]
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 HP:0001284 Areflexia 
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 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
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 HP:0001640 Cardiomegaly 
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 HP:0001716 Wolf-Parkinson-White syndrome 
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 HP:0001744 Splenomegaly "An abnormal enlargement of the spleen." [HPO:curators]
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 HP:0001945 Fever 
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 HP:0002093 Respiratory insufficiency 
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 HP:0002094 Dyspnea 
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 HP:0002205 Recurrent respiratory infections 
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 HP:0002240 Hepatomegaly "An abnormal enlargment of the liver." [HPO:curators]
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 HP:0002747 Respiratory insufficiency due to muscle weakness 
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 HP:0003236 Elevated serum creatine phosphokinase 
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 HP:0003701 Proximal muscle weakness "A lack of strength of the proximal muscles." [HPO:curators]
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 HP:0003725 Firm muscles 
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 HP:0004944 Cerebral aneurysm "The presence of a localized dilatation or ballooning of a cerebral artery." [HPO:curators]
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 HP:0005165 Shortened P-R interval on EKG 
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 HP:0006597 Diaphragmatic paralysis 
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 HP:0011400 Abnormal CNS myelination "An abnormality of `myelination` (GO:0042552) of nerves in the central nervous system." [DDD:fmuntoni]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000163754 GYG1 / P46976 / glycogenin 1  / reaction






 

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