ENSG00000171503


Homo sapiens

Features
Gene ID: ENSG00000171503
  
Biological name :ETFDH
  
Synonyms : electron transfer flavoprotein dehydrogenase / ETFDH / Q16134
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 4
Strand: 1
Band: q32.1
Gene start: 158672125
Gene end: 158709623
  
Corresponding Affymetrix probe sets: 205530_at (Human Genome U133 Plus 2.0 Array)   33494_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000303552
Ensembl peptide - ENSP00000426638
Ensembl peptide - ENSP00000425661
Ensembl peptide - ENSP00000422735
NCBI entrez gene - 2110     See in Manteia.
OMIM - 231675
RefSeq - NM_001281737
RefSeq - NM_001281738
RefSeq - NM_004453
RefSeq Peptide - NP_001268666
RefSeq Peptide - NP_004444
RefSeq Peptide - NP_001268667
swissprot - Q16134
swissprot - D6RAD5
swissprot - D6RJF8
Ensembl - ENSG00000171503
  
Related genetic diseases (OMIM): 231680 - Glutaric acidemia IIC, 231680
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 etfdhENSDARG00000038834Danio rerio
 ETFDHENSGALG00000009442Gallus gallus
 EtfdhENSMUSG00000027809Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000103  Pyridine nucleotide-disulphide oxidoreductase, class-II
 IPR017896  4Fe-4S ferredoxin-type, iron-sulphur binding domain
 IPR036188  FAD/NAD(P)-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006979 response to oxidative stress ISS
 biological_processGO:0022900 electron transport chain IDA
 biological_processGO:0022904 respiratory electron transport chain IBA
 biological_processGO:0033539 fatty acid beta-oxidation using acyl-CoA dehydrogenase IMP
 biological_processGO:0055114 oxidation-reduction process IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005743 mitochondrial inner membrane IEA
 cellular_componentGO:0005759 mitochondrial matrix TAS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0017133 mitochondrial electron transfer flavoprotein complex IBA
 cellular_componentGO:0031305 integral component of mitochondrial inner membrane IDA
 cellular_componentGO:0031966 mitochondrial membrane IDA
 molecular_functionGO:0004174 electron-transferring-flavoprotein dehydrogenase activity TAS
 molecular_functionGO:0009055 electron transfer activity IDA
 molecular_functionGO:0016491 oxidoreductase activity IDA
 molecular_functionGO:0043783 oxidoreductase activity, oxidizing metal ions with flavin as acceptor IBA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0048038 quinone binding IDA
 molecular_functionGO:0048039 ubiquinone binding IDA
 molecular_functionGO:0050660 flavin adenine dinucleotide binding ISS
 molecular_functionGO:0051536 iron-sulfur cluster binding IEA
 molecular_functionGO:0051539 4 iron, 4 sulfur cluster binding IEA


Pathways (from Reactome)
Pathway description
Respiratory electron transport


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000078 Abnormality of the genital tract 
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 HP:0000113 Polycystic kidney 
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 HP:0000114 Proximal renal tubule defect 
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 HP:0000256 Macrocephaly "The presence of an abnormally large `skull` (FMA:46565)." [HPO:probinson]
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 HP:0000260 Wide anterior fontanel "Enlargement of the anterior fontanelle with respect to age-dependent norms." [HPO:curators]
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 HP:0000348 High forehead "An abnormally increased height of the forehead." [HPO:curators]
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 HP:0000377 Abnormal form of ears "Abnormal form of the out part of the ear (also referred to as the auricle or pinna)." [HPO:curators]
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 HP:0000506 Telecanthus "An abnormally increased distance between the medial canthi (angle between eyelids) of the eyelids." [HPO:curators]
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 HP:0000519 Congenital cataract "A congenital `cataract` (HP:0000518)." [HPO:probinson]
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 HP:0000803 Renal cortical cysts 
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 HP:0000952 Jaundice "Yellow pigmentation of the skin or sclera due to bilirubin, which in turn is the result of increased bilirubin concentration in the bloodstream." [HPO:curators]
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 HP:0001252 Muscular hypotonia "Muscular hypotonia is an abnormally low muscle tone (the amount of tension or resistance to movement in a muscle), often involving reduced muscle strength. Hypotonia is characterized by a diminished resistance to passive stretching." [HPO:curators]
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 HP:0001302 Pachygyria "A congenital abnormality of the cerebral hemisphere chacterized by unusually thick gyrations (convolutions) of the cerebral cortex." [HPO:curators]
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 HP:0001324 Muscle weakness "Reduced strength of muscles." [HPO:curators]
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 HP:0001325 Hypoglycemic coma 
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 HP:0001397 Hepatic steatosis 
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 HP:0001943 Hypoglycemia "A lower than normal level of blood glucose." [HPO:curators]
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 HP:0001999 Facial dysmorphism 
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 HP:0002013 Vomiting 
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 HP:0002018 Nausea 
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 HP:0002089 Pulmonary hypoplasia 
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 HP:0002098 Respiratory distress 
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 HP:0002171 Gliosis 
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 HP:0002240 Hepatomegaly "An abnormal enlargment of the liver." [HPO:curators]
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 HP:0002614 Hepatic periportal necrosis 
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 HP:0002909 Generalized aminoaciduria 
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 HP:0003076 Glycosuria "The excretion of abnormal amounts of glucose in the urine, generally resulting in osmotic diuresis." [HPO:curators]
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 HP:0003150 Glutaric aciduria 
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 HP:0003219 Ethylmalonic aciduria 
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 HP:0003490 Defective dehydrogenation of isovaleryl CoA and butyryl CoA 
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 HP:0003530 Glutaric acidemia 
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 HP:0003647 Electron transfer flavoprotein-ubiquinone oxidoreductase defect 
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 HP:0003811 Neonatal death 
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 HP:0005280 Depressed nasal root and bridge 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000105379 ETFB / P38117 / electron transfer flavoprotein beta subunit  / reaction
 ENSG00000140374 ETFA / P13804 / electron transfer flavoprotein alpha subunit  / reaction






 

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