ENSG00000171680


Homo sapiens

Features
Gene ID: ENSG00000171680
  
Biological name :PLEKHG5
  
Synonyms : O94827 / pleckstrin homology and RhoGEF domain containing G5 / PLEKHG5
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: -1
Band: p36.31
Gene start: 6466092
Gene end: 6520061
  
Corresponding Affymetrix probe sets: 227142_at (Human Genome U133 Plus 2.0 Array)   237646_x_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000441445
Ensembl peptide - ENSP00000439625
Ensembl peptide - ENSP00000491569
Ensembl peptide - ENSP00000344570
Ensembl peptide - ENSP00000366954
Ensembl peptide - ENSP00000366957
Ensembl peptide - ENSP00000366961
Ensembl peptide - ENSP00000366969
Ensembl peptide - ENSP00000366977
Ensembl peptide - ENSP00000383704
Ensembl peptide - ENSP00000383706
NCBI entrez gene - 57449     See in Manteia.
OMIM - 611101
RefSeq - NM_001042665
RefSeq - NM_001042663
RefSeq - NM_001042664
RefSeq - NM_001265592
RefSeq - NM_001265593
RefSeq - NM_001265594
RefSeq - NM_020631
RefSeq - NM_198681
RefSeq Peptide - NP_065682
RefSeq Peptide - NP_941374
RefSeq Peptide - NP_001036129
RefSeq Peptide - NP_001036130
RefSeq Peptide - NP_001252521
RefSeq Peptide - NP_001252522
RefSeq Peptide - NP_001036128
RefSeq Peptide - NP_001252523
swissprot - O94827
swissprot - A0A1W2PPJ8
swissprot - Q5SY18
Ensembl - ENSG00000171680
  
Related genetic diseases (OMIM): 611067 - Spinal muscular atrophy, distal, autosomal recessive, 4, 611067
  615376 - Charcot-Marie-Tooth disease, recessive intermediate C, 615376
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 plekhg5aENSDARG00000025902Danio rerio
 plekhg5bENSDARG00000101752Danio rerio
 PLEKHG5ENSGALG00000027476Gallus gallus
 Q66T02ENSMUSG00000039713Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q3KR16 / PLEKHG6 / pleckstrin homology and RhoGEF domain containing G6ENSG0000000832325
Q6ZR37 / PLEKHG7 / pleckstrin homology and RhoGEF domain containing G7ENSG000001875108


Protein motifs (from Interpro)
Interpro ID Name
 IPR000219  Dbl homology (DH) domain
 IPR001849  Pleckstrin homology domain
 IPR011993  PH-like domain superfamily
 IPR029071  Ubiquitin-like domain superfamily
 IPR035899  Dbl homology (DH) domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007186 G-protein coupled receptor signaling pathway TAS
 biological_processGO:0035023 regulation of Rho protein signal transduction IEA
 biological_processGO:0035767 endothelial cell chemotaxis IEA
 biological_processGO:0043065 positive regulation of apoptotic process TAS
 biological_processGO:0043123 positive regulation of I-kappaB kinase/NF-kappaB signaling HMP
 biological_processGO:0043542 endothelial cell migration IEA
 biological_processGO:0051056 regulation of small GTPase mediated signal transduction TAS
 biological_processGO:0065009 regulation of molecular function IEA
 cellular_componentGO:0005737 cytoplasm ISS
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005911 cell-cell junction IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0030027 lamellipodium ISS
 cellular_componentGO:0030054 cell junction IEA
 cellular_componentGO:0030139 endocytic vesicle IEA
 cellular_componentGO:0042995 cell projection IEA
 cellular_componentGO:0048471 perinuclear region of cytoplasm IEA
 molecular_functionGO:0004871 obsolete signal transducer activity HMP
 molecular_functionGO:0005085 guanyl-nucleotide exchange factor activity TAS
 molecular_functionGO:0005089 Rho guanyl-nucleotide exchange factor activity TAS


Pathways (from Reactome)
Pathway description
NRAGE signals death through JNK
Rho GTPase cycle
G alpha (12/13) signalling events


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0001284 Areflexia 
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 HP:0001761 Pes cavus 
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 HP:0001762 Talipes equinovarus "Also called clubfoot typically has 4 main components: inversion and adduction of the forefoot; inversion of the heel and hindfoot; equinus (limitation of extension) of the ankle and subtalar joint; and internal rotation of the leg. Clubfoot is a complex, multifactorial deformity with genetic and intrauterine factors. One popular theory postulates that a clubfoot is a result of intrauterine maldevelopment of the talus that leads to adduction and plantarflexion of the foot. On radiographic projection a clubfoot can be noted as parallel axes of talus and calcaneus." [HPO:curators]
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 HP:0001765 Hammer toes 
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 HP:0002355 Difficulty walking 
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 HP:0002366 Lower motor neuron signs 
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 HP:0002460 Distal muscle weakness "Reduced strength of the distal musculature." [HPO:curators]
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 HP:0002515 Waddling gait 
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 HP:0002650 Scoliosis "The presence of an abnormal lateral curvature of the spine." [HPO:curators]
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 HP:0002747 Respiratory insufficiency due to muscle weakness 
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 HP:0002936 Distal sensory impairment 
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 HP:0003307 Hyperlordosis 
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 HP:0003387 Loss of large myelinated fibers 
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 HP:0003431 Decreased motor nerve conduction velocity (NCV) 
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 HP:0003445 EMG shows neuropathic changes 
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 HP:0003551 Difficulty climbing stairs 
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 HP:0003678 Rapidly progressive 
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 HP:0003693 Distal amyotrophy "Muscular atrophy affecting muscles in the distal portions of the extremities." [HPO:curators]
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 HP:0003697 Scapuloperoneal atrophy 
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 HP:0003701 Proximal muscle weakness "A lack of strength of the proximal muscles." [HPO:curators]
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 HP:0007269 Spinal muscular atrophy "Muscular weakness and atrophy related to loss of the motor neurons of the spinal cord and brainstem." [HPO:curators]
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 HP:0008180 Mildly elevated creatine phosphokinase 
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 HP:0009473 Joint contractures involving the joints of the hand 
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 HP:0011463 Childhood onset "Onset of disease at the age of between 1 and 5 years." [DDD:hfirth]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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