ENSG00000172765


Homo sapiens

Features
Gene ID: ENSG00000172765
  
Biological name :TMCC1
  
Synonyms : O94876 / TMCC1 / transmembrane and coiled-coil domain family 1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 3
Strand: -1
Band: q22.1
Gene start: 129647792
Gene end: 129893576
  
Corresponding Affymetrix probe sets: 213349_at (Human Genome U133 Plus 2.0 Array)   213351_s_at (Human Genome U133 Plus 2.0 Array)   213352_at (Human Genome U133 Plus 2.0 Array)   227112_at (Human Genome U133 Plus 2.0 Array)   237943_at (Human Genome U133 Plus 2.0 Array)   239029_at (Human Genome U133 Plus 2.0 Array)   239662_x_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000404711
Ensembl peptide - ENSP00000389892
Ensembl peptide - ENSP00000422544
Ensembl peptide - ENSP00000427352
Ensembl peptide - ENSP00000426180
Ensembl peptide - ENSP00000376930
NCBI entrez gene - 23023     See in Manteia.
OMIM - 616242
RefSeq - XM_017005941
RefSeq - XM_011512579
RefSeq - XM_011512580
RefSeq - XM_011512581
RefSeq - XM_011512582
RefSeq - XM_011512583
RefSeq - XM_011512584
RefSeq - XM_017005931
RefSeq - XM_017005932
RefSeq - XM_017005933
RefSeq - XM_017005934
RefSeq - XM_017005935
RefSeq - XM_017005936
RefSeq - XM_017005937
RefSeq - XM_017005938
RefSeq - XM_017005939
RefSeq - XM_017005940
RefSeq - NM_001017395
RefSeq - NM_001128224
RefSeq - NM_001349263
RefSeq - NM_001349264
RefSeq - NM_001349265
RefSeq - NM_001349266
RefSeq - NM_001349268
RefSeq - NM_001349269
RefSeq - NM_001349270
RefSeq - NM_001349273
RefSeq - NM_015008
RefSeq - XM_006713542
RefSeq - XM_006713543
RefSeq - XM_006713544
RefSeq - XM_006713550
RefSeq - XM_006713552
RefSeq - XM_006713553
RefSeq - XM_011512572
RefSeq - XM_011512573
RefSeq - XM_011512576
RefSeq Peptide - NP_001336192
RefSeq Peptide - NP_001336199
RefSeq Peptide - NP_001336202
RefSeq Peptide - NP_055823
RefSeq Peptide - NP_001017395
RefSeq Peptide - NP_001121696
RefSeq Peptide - NP_001336193
RefSeq Peptide - NP_001336194
RefSeq Peptide - NP_001336195
RefSeq Peptide - NP_001336197
RefSeq Peptide - NP_001336198
swissprot - D6RH19
swissprot - O94876
swissprot - Q6N039
swissprot - D6RBT7
swissprot - E9PC87
Ensembl - ENSG00000172765
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TMCC1 (1 of many)ENSDARG00000076747Danio rerio
 tmcc1bENSDARG00000060954Danio rerio
 TMCC1ENSGALG00000008487Gallus gallus
 Tmcc1ENSMUSG00000030126Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TMCC2 / O75069 / transmembrane and coiled-coil domain family 2ENSG0000013306954
TMCC3 / Q9ULS5 / transmembrane and coiled-coil domain family 3ENSG0000005770436
TEX28 / O15482 / testis expressed 28ENSG0000027805720


Protein motifs (from Interpro)
Interpro ID Name
 IPR019394  Testis-specific protein TEX28/transmembrane and coiled-coil domains protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007029 endoplasmic reticulum organization IMP
 biological_processGO:0051260 protein homooligomerization IMP
 biological_processGO:0051291 protein heterooligomerization IMP
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0005791 rough endoplasmic reticulum IMP
 cellular_componentGO:0005829 cytosol IMP
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0042803 protein homodimerization activity IMP
 molecular_functionGO:0046982 protein heterodimerization activity IMP


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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