ENSMUSG00000030126


Mus musculus

Features
Gene ID: ENSMUSG00000030126
  
Biological name :Tmcc1
  
Synonyms : Q69ZZ6 / Tmcc1 / transmembrane and coiled coil domains 1
  
Possible biological names infered from orthology : O94876 / transmembrane and coiled-coil domain family 1
  
Species: Mus musculus
  
Chr. number: 6
Strand: -1
Band: E3
Gene start: 116018611
Gene end: 116193486
  
Corresponding Affymetrix probe sets: 10547140 (MoGene1.0st)   1437776_at (Mouse Genome 430 2.0 Array)   1440384_at (Mouse Genome 430 2.0 Array)   1441370_at (Mouse Genome 430 2.0 Array)   1455353_at (Mouse Genome 430 2.0 Array)   1455659_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000145456
Ensembl peptide - ENSMUSP00000134455
Ensembl peptide - ENSMUSP00000144971
Ensembl peptide - ENSMUSP00000032222
Ensembl peptide - ENSMUSP00000086285
Ensembl peptide - ENSMUSP00000133665
Ensembl peptide - ENSMUSP00000133794
Ensembl peptide - ENSMUSP00000134148
Ensembl peptide - ENSMUSP00000134407
NCBI entrez gene - 330401     See in Manteia.
MGI - MGI:2442368
RefSeq - XM_017321657
RefSeq - XM_006506308
RefSeq - XM_006506309
RefSeq - XM_006506310
RefSeq - XM_006506311
RefSeq - XM_006506312
RefSeq - XM_006506314
RefSeq - XM_006506315
RefSeq - NM_177412
RefSeq Peptide - NP_803131
swissprot - G3UZ99
swissprot - F8WJ98
swissprot - G3UXR4
swissprot - Q3TQU9
swissprot - Q69ZZ6
swissprot - A0A0N4SWB9
Ensembl - ENSMUSG00000030126
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TMCC1 (1 of many)ENSDARG00000076747Danio rerio
 tmcc1bENSDARG00000060954Danio rerio
 TMCC1ENSGALG00000008487Gallus gallus
 TMCC1ENSG00000172765Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Tmcc2 / Q80W04 / transmembrane and coiled-coil domains 2 / O75069* / transmembrane and coiled-coil domain family 2*ENSMUSG0000004206653
Tmcc3 / Q8R310 / Transmembrane and coiled-coil domain protein 3 / Q9ULS5* / transmembrane and coiled-coil domain family 3*ENSMUSG0000002002336
Tex28 / testis expressed 28 / O15482*ENSMUSG0000006256417


Protein motifs (from Interpro)
Interpro ID Name
 IPR019394  Testis-specific protein TEX28/transmembrane and coiled-coil domains protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007029 endoplasmic reticulum organization ISO
 biological_processGO:0051260 protein homooligomerization ISO
 biological_processGO:0051291 protein heterooligomerization ISO
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0005791 rough endoplasmic reticulum ISO
 cellular_componentGO:0005829 cytosol ISO
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0042803 protein homodimerization activity ISO
 molecular_functionGO:0046982 protein heterodimerization activity ISO


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr