ENSMUSG00000020023


Mus musculus

Features
Gene ID: ENSMUSG00000020023
  
Biological name :Tmcc3
  
Synonyms : Q8R310 / Tmcc3 / Transmembrane and coiled-coil domain protein 3
  
Possible biological names infered from orthology : Q9ULS5 / transmembrane and coiled-coil domain family 3
  
Species: Mus musculus
  
Chr. number: 10
Strand: 1
Band: C2
Gene start: 94311949
Gene end: 94590956
  
Corresponding Affymetrix probe sets: 10365891 (MoGene1.0st)   1434252_at (Mouse Genome 430 2.0 Array)   1434253_s_at (Mouse Genome 430 2.0 Array)   1435554_at (Mouse Genome 430 2.0 Array)   1451794_at (Mouse Genome 430 2.0 Array)   1454889_x_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000121456
Ensembl peptide - ENSMUSP00000119496
Ensembl peptide - ENSMUSP00000119751
Ensembl peptide - ENSMUSP00000063264
Ensembl peptide - ENSMUSP00000112401
Ensembl peptide - ENSMUSP00000112669
Ensembl peptide - ENSMUSP00000113122
NCBI entrez gene - 319880     See in Manteia.
MGI - MGI:2442900
RefSeq - XM_011243475
RefSeq - NM_001168684
RefSeq - NM_172051
RefSeq - NM_177026
RefSeq - XM_006513751
RefSeq - XM_006513752
RefSeq - XM_006513753
RefSeq - XM_006513754
RefSeq Peptide - NP_796000
RefSeq Peptide - NP_001162155
RefSeq Peptide - NP_742048
swissprot - D3Z1L1
swissprot - Q8R310
swissprot - F6R793
swissprot - F6S041
Ensembl - ENSMUSG00000020023
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tmcc3ENSDARG00000045525Danio rerio
 ENSGALG00000011320Gallus gallus
 TMCC3ENSG00000057704Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Tmcc2 / Q80W04 / transmembrane and coiled-coil domains 2 / O75069* / transmembrane and coiled-coil domain family 2*ENSMUSG0000004206652
Tmcc1 / Q69ZZ6 / transmembrane and coiled coil domains 1 / O94876* / transmembrane and coiled-coil domain family 1*ENSMUSG0000003012648
Tex28 / testis expressed 28 / O15482*ENSMUSG0000006256422


Protein motifs (from Interpro)
Interpro ID Name
 IPR019394  Testis-specific protein TEX28/transmembrane and coiled-coil domains protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr