ENSDARG00000045525


Danio rerio

Features
Gene ID: ENSDARG00000045525
  
Biological name :tmcc3
  
Synonyms : tmcc3 / transmembrane and coiled-coil domain family 3
  
Possible biological names infered from orthology : Q8R310 / Q9ULS5 / Transmembrane and coiled-coil domain protein 3
  
Species: Danio rerio
  
Chr. number: 4
Strand: -1
Band:
Gene start: 25754725
Gene end: 25812329
  
Corresponding Affymetrix probe sets: Dr.25431.1.S1_at (Zebrafish Array)   Dr.25431.2.A1_at (Zebrafish Array)   Dr.3108.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000107843
Ensembl peptide - ENSDARP00000117442
NCBI entrez gene - 556763     See in Manteia.
swissprot - Q5RH30
swissprot - Q5RH38
ZFIN ID - ZDB-GENE-030131-1811
Ensembl - ENSDARG00000045525
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000011320Gallus gallus
 TMCC3ENSG00000057704Homo sapiens
 Tmcc3ENSMUSG00000020023Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tmcc1b / transmembrane and coiled-coil domain family 1b / TMCC1* / O94876* / transmembrane and coiled-coil domain family 1*ENSDARG0000006095447
tmcc2 / transmembrane and coiled-coil domain family 2 / O75069* / Q80W04* / transmembrane and coiled-coil domains 2*ENSDARG0000004600746
TMCC1 (1 of many) / transmembrane and coiled-coil domain family 1 / TMCC1* / Q69ZZ6* / O94876* / transmembrane and coiled coil domains 1*ENSDARG0000007674743


Protein motifs (from Interpro)
Interpro ID Name
 IPR019394  Testis-specific protein TEX28/transmembrane and coiled-coil domains protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr