ENSDARG00000046007


Danio rerio

Features
Gene ID: ENSDARG00000046007
  
Biological name :tmcc2
  
Synonyms : tmcc2 / transmembrane and coiled-coil domain family 2
  
Possible biological names infered from orthology : O75069 / Q80W04 / transmembrane and coiled-coil domains 2
  
Species: Danio rerio
  
Chr. number: 22
Strand: -1
Band:
Gene start: 591809
Gene end: 600016
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000080869
NCBI entrez gene - 560064     See in Manteia.
RefSeq - NM_001044919
RefSeq Peptide - NP_001038384
swissprot - B7ZV20
ZFIN ID - ZDB-GENE-091202-2
Ensembl - ENSDARG00000046007
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TMCC2ENSGALG00000034281Gallus gallus
 TMCC2ENSG00000133069Homo sapiens
 Tmcc2ENSMUSG00000042066Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tmcc1b / transmembrane and coiled-coil domain family 1b / TMCC1* / O94876* / transmembrane and coiled-coil domain family 1*ENSDARG0000006095457
TMCC1 (1 of many) / transmembrane and coiled-coil domain family 1 / TMCC1* / Q69ZZ6* / O94876* / transmembrane and coiled coil domains 1*ENSDARG0000007674751
tmcc3 / transmembrane and coiled-coil domain family 3 / Q8R310* / Q9ULS5* / Transmembrane and coiled-coil domain protein 3 *ENSDARG0000004552547


Protein motifs (from Interpro)
Interpro ID Name
 IPR019394  Testis-specific protein TEX28/transmembrane and coiled-coil domains protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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