ENSMUSG00000042066


Mus musculus

Features
Gene ID: ENSMUSG00000042066
  
Biological name :Tmcc2
  
Synonyms : Q80W04 / Tmcc2 / transmembrane and coiled-coil domains 2
  
Possible biological names infered from orthology : O75069 / transmembrane and coiled-coil domain family 2
  
Species: Mus musculus
  
Chr. number: 1
Strand: -1
Band: E4
Gene start: 132356315
Gene end: 132391281
  
Corresponding Affymetrix probe sets: 10357698 (MoGene1.0st)   1428108_x_at (Mouse Genome 430 2.0 Array)   1452666_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000038369
Ensembl peptide - ENSMUSP00000115721
Ensembl peptide - ENSMUSP00000118844
NCBI entrez gene - 68875     See in Manteia.
MGI - MGI:1916125
RefSeq - XM_006529852
RefSeq - NM_001311107
RefSeq - NM_001311108
RefSeq - NM_178874
RefSeq Peptide - NP_001298037
RefSeq Peptide - NP_849205
RefSeq Peptide - NP_001298036
swissprot - Q3T9T1
swissprot - Q3TZY4
swissprot - Q80W04
Ensembl - ENSMUSG00000042066
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tmcc2ENSDARG00000046007Danio rerio
 TMCC2ENSGALG00000034281Gallus gallus
 TMCC2ENSG00000133069Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Tmcc1 / Q69ZZ6 / transmembrane and coiled coil domains 1 / O94876* / transmembrane and coiled-coil domain family 1*ENSMUSG0000003012649
Tmcc3 / Q8R310 / Transmembrane and coiled-coil domain protein 3 / Q9ULS5* / transmembrane and coiled-coil domain family 3*ENSMUSG0000002002335
Tex28 / testis expressed 28 / O15482*ENSMUSG0000006256416


Protein motifs (from Interpro)
Interpro ID Name
 IPR019394  Testis-specific protein TEX28/transmembrane and coiled-coil domains protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0042982 amyloid precursor protein metabolic process IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr