ENSG00000173068


Homo sapiens

Features
Gene ID: ENSG00000173068
  
Biological name :BNC2
  
Synonyms : basonuclin 2 / BNC2 / Q6ZN30
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 9
Strand: -1
Band: p22.2
Gene start: 16409503
Gene end: 16870843
  
Corresponding Affymetrix probe sets: 220272_at (Human Genome U133 Plus 2.0 Array)   229942_at (Human Genome U133 Plus 2.0 Array)   230722_at (Human Genome U133 Plus 2.0 Array)   235723_at (Human Genome U133 Plus 2.0 Array)   238478_at (Human Genome U133 Plus 2.0 Array)   243445_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000474832
Ensembl peptide - ENSP00000474647
Ensembl peptide - ENSP00000477717
Ensembl peptide - ENSP00000482793
Ensembl peptide - ENSP00000370041
Ensembl peptide - ENSP00000370042
Ensembl peptide - ENSP00000370047
Ensembl peptide - ENSP00000392212
Ensembl peptide - ENSP00000408370
Ensembl peptide - ENSP00000431516
Ensembl peptide - ENSP00000444640
Ensembl peptide - ENSP00000473935
Ensembl peptide - ENSP00000474045
Ensembl peptide - ENSP00000474468
NCBI entrez gene - 54796     See in Manteia.
OMIM - 608669
RefSeq - XM_017014826
RefSeq - NM_001317939
RefSeq - NM_001317940
RefSeq - NM_017637
RefSeq - XM_011517924
RefSeq - XM_017014819
RefSeq - XM_017014820
RefSeq - XM_017014821
RefSeq - XM_017014824
RefSeq Peptide - NP_001304869
RefSeq Peptide - NP_060107
RefSeq Peptide - NP_001304868
swissprot - Q06HC7
swissprot - Q6ZN30
swissprot - S4R351
swissprot - S4R3K9
swissprot - B1APH0
swissprot - F5H586
swissprot - H0Y4J1
swissprot - H0Y6W5
swissprot - S4R3R8
swissprot - S4R3X5
swissprot - A0A1B0GX98
swissprot - Q06HB9
Ensembl - ENSG00000173068
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Bnc2ENSMUSG00000028487Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
BNC1 / Q01954 / basonuclin 1ENSG0000016959439


Protein motifs (from Interpro)
Interpro ID Name
 IPR007527  Zinc finger, SWIM-type
 IPR013087  Zinc finger C2H2-type
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0003416 endochondral bone growth IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0043586 tongue development IEA
 biological_processGO:0060021 roof of mouth development IEA
 biological_processGO:0060485 mesenchyme development IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IDA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr