ENSG00000173376


Homo sapiens

Features
Gene ID: ENSG00000173376
  
Biological name :NDNF
  
Synonyms : NDNF / neuron derived neurotrophic factor / Q8TB73
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 4
Strand: -1
Band: q27
Gene start: 121035613
Gene end: 121073021
  
Corresponding Affymetrix probe sets: 219747_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000369014
Ensembl peptide - ENSP00000426723
Ensembl peptide - ENSP00000423352
NCBI entrez gene - 79625     See in Manteia.
OMIM - 616506
RefSeq - NM_024574
RefSeq Peptide - NP_078850
swissprot - D6RF18
swissprot - D6R972
swissprot - Q8TB73
Ensembl - ENSG00000173376
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ndnfENSDARG00000062936Danio rerio
 ENSGALG00000011962Gallus gallus
 NdnfENSMUSG00000049001Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR003961  Fibronectin type III
 IPR013783  Immunoglobulin-like fold
 IPR019326  Protein of unknown function DUF2369
 IPR036116  Fibronectin type III superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001525 angiogenesis IDA
 biological_processGO:0001764 neuron migration IDA
 biological_processGO:0002931 response to ischemia IEA
 biological_processGO:0007263 nitric oxide mediated signal transduction IDA
 biological_processGO:0007399 nervous system development IEA
 biological_processGO:0010811 positive regulation of cell-substrate adhesion IEA
 biological_processGO:0010976 positive regulation of neuron projection development IDA
 biological_processGO:0019800 peptide cross-linking via chondroitin 4-sulfate glycosaminoglycan IEA
 biological_processGO:0030198 extracellular matrix organization IEA
 biological_processGO:0043524 negative regulation of neuron apoptotic process IDA
 biological_processGO:0061042 vascular wound healing IEA
 biological_processGO:0071456 cellular response to hypoxia IDA
 biological_processGO:2000352 negative regulation of endothelial cell apoptotic process IDA
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0031012 extracellular matrix ISS
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0005539 glycosaminoglycan binding IEA
 molecular_functionGO:0008201 heparin binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr