ENSMUSG00000049001


Mus musculus

Features
Gene ID: ENSMUSG00000049001
  
Biological name :Ndnf
  
Synonyms : Ndnf / Protein NDNF / Q8C119
  
Possible biological names infered from orthology : neuron derived neurotrophic factor / Q8TB73
  
Species: Mus musculus
  
Chr. number: 6
Strand: 1
Band: C1
Gene start: 65671590
Gene end: 65712326
  
Corresponding Affymetrix probe sets: 10538802 (MoGene1.0st)   1453225_at (Mouse Genome 430 2.0 Array)   1460465_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000051297
NCBI entrez gene - 68169     See in Manteia.
MGI - MGI:1915419
RefSeq - NM_172399
RefSeq - XM_006506528
RefSeq Peptide - NP_765987
swissprot - Q8C119
Ensembl - ENSMUSG00000049001
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ndnfENSDARG00000062936Danio rerio
 ENSGALG00000011962Gallus gallus
 NDNFENSG00000173376Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR003961  Fibronectin type III
 IPR013783  Immunoglobulin-like fold
 IPR019326  Protein of unknown function DUF2369
 IPR036116  Fibronectin type III superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001525 angiogenesis IEA
 biological_processGO:0001764 neuron migration IEA
 biological_processGO:0002931 response to ischemia IDA
 biological_processGO:0007263 nitric oxide mediated signal transduction IEA
 biological_processGO:0007399 nervous system development IEA
 biological_processGO:0010811 positive regulation of cell-substrate adhesion IDA
 biological_processGO:0010976 positive regulation of neuron projection development IEA
 biological_processGO:0019800 peptide cross-linking via chondroitin 4-sulfate glycosaminoglycan IDA
 biological_processGO:0030198 extracellular matrix organization IDA
 biological_processGO:0043524 negative regulation of neuron apoptotic process IEA
 biological_processGO:0061042 vascular wound healing IMP
 biological_processGO:0071456 cellular response to hypoxia IEA
 biological_processGO:2000352 negative regulation of endothelial cell apoptotic process IEA
 cellular_componentGO:0005576 extracellular region ISO
 cellular_componentGO:0005622 intracellular IEA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0005539 glycosaminoglycan binding IDA
 molecular_functionGO:0008201 heparin binding IDA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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